Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.19■■■□□ 2.26
RNF38Q9H0F5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.18■■■□□ 2.26
RNF38Q9H0F5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.17■■■□□ 2.26
RNF38Q9H0F5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.17■■■□□ 2.26
RNF38Q9H0F5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.15■■■□□ 2.26
RNF38Q9H0F5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.14■■■□□ 2.26
RNF38Q9H0F5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF38Q9H0F5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.11■■■□□ 2.25
RNF38Q9H0F5 SUZ12P1-203ENST00000578195 985 ntBASIC29.09■■■□□ 2.25
RNF38Q9H0F5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RNF38Q9H0F5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
RNF38Q9H0F5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RNF38Q9H0F5 AL133380.1-201ENST00000506013 324 ntBASIC29.03■■■□□ 2.24
RNF38Q9H0F5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.02■■■□□ 2.24
RNF38Q9H0F5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
RNF38Q9H0F5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RNF38Q9H0F5 CAHM-201ENST00000604200 896 ntBASIC29.01■■■□□ 2.23
RNF38Q9H0F5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.99■■■□□ 2.23
RNF38Q9H0F5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RNF38Q9H0F5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
RNF38Q9H0F5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RNF38Q9H0F5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF38Q9H0F5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF38Q9H0F5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.97■■■□□ 2.23
RNF38Q9H0F5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF38Q9H0F5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.96■■■□□ 2.23
RNF38Q9H0F5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.94■■■□□ 2.22
RNF38Q9H0F5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF38Q9H0F5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RNF38Q9H0F5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RNF38Q9H0F5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.93■■■□□ 2.22
RNF38Q9H0F5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RNF38Q9H0F5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.91■■■□□ 2.22
RNF38Q9H0F5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RNF38Q9H0F5 AL391121.1-201ENST00000607967 1349 ntBASIC28.88■■■□□ 2.21
RNF38Q9H0F5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RNF38Q9H0F5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RNF38Q9H0F5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.85■■■□□ 2.21
RNF38Q9H0F5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RNF38Q9H0F5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
RNF38Q9H0F5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RNF38Q9H0F5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
RNF38Q9H0F5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RNF38Q9H0F5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
RNF38Q9H0F5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RNF38Q9H0F5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RNF38Q9H0F5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
RNF38Q9H0F5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.75■■■□□ 2.19
RNF38Q9H0F5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.74■■■□□ 2.19
RNF38Q9H0F5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
RNF38Q9H0F5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RNF38Q9H0F5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.72■■■□□ 2.19
RNF38Q9H0F5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RNF38Q9H0F5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RNF38Q9H0F5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RNF38Q9H0F5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.69■■■□□ 2.18
RNF38Q9H0F5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF38Q9H0F5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.69■■■□□ 2.18
RNF38Q9H0F5 RPS2P35-201ENST00000443417 897 ntBASIC28.68■■■□□ 2.18
RNF38Q9H0F5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RNF38Q9H0F5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF38Q9H0F5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RNF38Q9H0F5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RNF38Q9H0F5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RNF38Q9H0F5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
RNF38Q9H0F5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF38Q9H0F5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF38Q9H0F5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF38Q9H0F5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.62■■■□□ 2.17
RNF38Q9H0F5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RNF38Q9H0F5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.61■■■□□ 2.17
RNF38Q9H0F5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RNF38Q9H0F5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.6■■■□□ 2.17
RNF38Q9H0F5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RNF38Q9H0F5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.58■■■□□ 2.17
RNF38Q9H0F5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
RNF38Q9H0F5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF38Q9H0F5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF38Q9H0F5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RNF38Q9H0F5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RNF38Q9H0F5 AL162393.1-201ENST00000437852 946 ntBASIC28.55■■■□□ 2.16
RNF38Q9H0F5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.54■■■□□ 2.16
RNF38Q9H0F5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RNF38Q9H0F5 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.54■■■□□ 2.16
RNF38Q9H0F5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF38Q9H0F5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RNF38Q9H0F5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RNF38Q9H0F5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
RNF38Q9H0F5 WASH5P-204ENST00000632292 975 ntBASIC28.52■■■□□ 2.16
RNF38Q9H0F5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.51■■■□□ 2.15
RNF38Q9H0F5 AP006261.1-201ENST00000584783 668 ntBASIC28.51■■■□□ 2.15
RNF38Q9H0F5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
RNF38Q9H0F5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.5■■■□□ 2.15
RNF38Q9H0F5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.49■■■□□ 2.15
RNF38Q9H0F5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RNF38Q9H0F5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.47■■■□□ 2.15
RNF38Q9H0F5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RNF38Q9H0F5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF38Q9H0F5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
RNF38Q9H0F5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms