Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRGV9Q99603 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.69■■□□□ 1.06
TRGV9Q99603 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV9Q99603 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.68■■□□□ 1.06
TRGV9Q99603 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.67■■□□□ 1.06
TRGV9Q99603 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.66■■□□□ 1.06
TRGV9Q99603 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.65■■□□□ 1.06
TRGV9Q99603 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV9Q99603 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV9Q99603 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV9Q99603 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRGV9Q99603 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.64■■□□□ 1.06
TRGV9Q99603 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV9Q99603 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.63■■□□□ 1.05
TRGV9Q99603 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV9Q99603 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRGV9Q99603 AC006077.2-201ENST00000623591 457 ntBASIC21.61■■□□□ 1.05
TRGV9Q99603 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV9Q99603 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRGV9Q99603 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.6■■□□□ 1.05
TRGV9Q99603 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRGV9Q99603 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRGV9Q99603 AC120057.4-201ENST00000624722 1615 ntBASIC21.57■■□□□ 1.04
TRGV9Q99603 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRGV9Q99603 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.56■■□□□ 1.04
TRGV9Q99603 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV9Q99603 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
TRGV9Q99603 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRGV9Q99603 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.53■■□□□ 1.04
TRGV9Q99603 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV9Q99603 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
TRGV9Q99603 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.51■■□□□ 1.03
TRGV9Q99603 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRGV9Q99603 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV9Q99603 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV9Q99603 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRGV9Q99603 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRGV9Q99603 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRGV9Q99603 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.48■■□□□ 1.03
TRGV9Q99603 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRGV9Q99603 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV9Q99603 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV9Q99603 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV9Q99603 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.46■■□□□ 1.03
TRGV9Q99603 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV9Q99603 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV9Q99603 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV9Q99603 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV9Q99603 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRGV9Q99603 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV9Q99603 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.43■■□□□ 1.02
TRGV9Q99603 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV9Q99603 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRGV9Q99603 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV9Q99603 ZNRF2P1-201ENST00000441407 443 ntBASIC21.4■■□□□ 1.02
TRGV9Q99603 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.4■■□□□ 1.02
TRGV9Q99603 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRGV9Q99603 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV9Q99603 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV9Q99603 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV9Q99603 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.39■■□□□ 1.01
TRGV9Q99603 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRGV9Q99603 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.38■■□□□ 1.01
TRGV9Q99603 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV9Q99603 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV9Q99603 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRGV9Q99603 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.36■■□□□ 1.01
TRGV9Q99603 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.36■■□□□ 1.01
TRGV9Q99603 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.34■■□□□ 1.01
TRGV9Q99603 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRGV9Q99603 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRGV9Q99603 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.32■■□□□ 1
TRGV9Q99603 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.32■■□□□ 1
TRGV9Q99603 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.31■■□□□ 1
TRGV9Q99603 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV9Q99603 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.3■■□□□ 1
TRGV9Q99603 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRGV9Q99603 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.29■■□□□ 1
TRGV9Q99603 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV9Q99603 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV9Q99603 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TRGV9Q99603 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.27■■□□□ 1
TRGV9Q99603 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV9Q99603 ABCB10P1-201ENST00000614297 2181 ntBASIC21.25■□□□□ 0.99
TRGV9Q99603 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.25■□□□□ 0.99
TRGV9Q99603 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV9Q99603 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRGV9Q99603 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV9Q99603 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRGV9Q99603 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV9Q99603 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV9Q99603 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRGV9Q99603 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRGV9Q99603 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.19■□□□□ 0.98
TRGV9Q99603 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRGV9Q99603 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRGV9Q99603 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRGV9Q99603 DYNLL1-208ENST00000550178 581 ntBASIC21.17■□□□□ 0.98
TRGV9Q99603 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRGV9Q99603 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms