Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SPENQ96T58 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SPENQ96T58 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SPENQ96T58 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SPENQ96T58 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.72■■□□□ 1.71
SPENQ96T58 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
SPENQ96T58 AP006261.1-201ENST00000584783 668 ntBASIC25.7■■□□□ 1.7
SPENQ96T58 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SPENQ96T58 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.65■■□□□ 1.7
SPENQ96T58 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPENQ96T58 AL133380.1-201ENST00000506013 324 ntBASIC25.64■■□□□ 1.7
SPENQ96T58 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.63■■□□□ 1.69
SPENQ96T58 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SPENQ96T58 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPENQ96T58 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPENQ96T58 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.6■■□□□ 1.69
SPENQ96T58 DUX4L28-201ENST00000623687 678 ntBASIC25.6■■□□□ 1.69
SPENQ96T58 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPENQ96T58 AC087741.3-201ENST00000624270 1347 ntBASIC25.58■■□□□ 1.69
SPENQ96T58 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.58■■□□□ 1.69
SPENQ96T58 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SPENQ96T58 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPENQ96T58 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SPENQ96T58 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPENQ96T58 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPENQ96T58 ABHD17AP4-201ENST00000411545 909 ntBASIC25.54■■□□□ 1.68
SPENQ96T58 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPENQ96T58 MIR7108-201ENST00000614319 87 ntBASIC25.5■■□□□ 1.67
SPENQ96T58 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPENQ96T58 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPENQ96T58 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.47■■□□□ 1.67
SPENQ96T58 HLA-V-202ENST00000446817 847 ntBASIC25.46■■□□□ 1.67
SPENQ96T58 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SPENQ96T58 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.44■■□□□ 1.66
SPENQ96T58 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPENQ96T58 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SPENQ96T58 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.43■■□□□ 1.66
SPENQ96T58 MIR3665-201ENST00000578708 105 ntBASIC25.43■■□□□ 1.66
SPENQ96T58 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SPENQ96T58 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPENQ96T58 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPENQ96T58 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.41■■□□□ 1.66
SPENQ96T58 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.41■■□□□ 1.66
SPENQ96T58 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.41■■□□□ 1.66
SPENQ96T58 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.39■■□□□ 1.65
SPENQ96T58 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.38■■□□□ 1.65
SPENQ96T58 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
SPENQ96T58 MIR762-201ENST00000390236 83 ntBASIC25.36■■□□□ 1.65
SPENQ96T58 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPENQ96T58 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.35■■□□□ 1.65
SPENQ96T58 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.34■■□□□ 1.65
SPENQ96T58 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SPENQ96T58 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SPENQ96T58 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.32■■□□□ 1.64
SPENQ96T58 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SPENQ96T58 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SPENQ96T58 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.31■■□□□ 1.64
SPENQ96T58 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
SPENQ96T58 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SPENQ96T58 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPENQ96T58 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPENQ96T58 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.29■■□□□ 1.64
SPENQ96T58 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
SPENQ96T58 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SPENQ96T58 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.26■■□□□ 1.63
SPENQ96T58 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.25■■□□□ 1.63
SPENQ96T58 AC044849.2-201ENST00000606596 710 ntBASIC25.25■■□□□ 1.63
SPENQ96T58 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPENQ96T58 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPENQ96T58 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.25■■□□□ 1.63
SPENQ96T58 AC005559.1-201ENST00000589661 871 ntBASIC25.24■■□□□ 1.63
SPENQ96T58 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
SPENQ96T58 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SPENQ96T58 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPENQ96T58 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SPENQ96T58 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.2■■□□□ 1.62
SPENQ96T58 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPENQ96T58 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SPENQ96T58 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
SPENQ96T58 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPENQ96T58 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.17■■□□□ 1.62
SPENQ96T58 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.17■■□□□ 1.62
SPENQ96T58 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SPENQ96T58 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SPENQ96T58 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.16■■□□□ 1.62
SPENQ96T58 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.15■■□□□ 1.62
SPENQ96T58 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.15■■□□□ 1.62
SPENQ96T58 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPENQ96T58 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.15■■□□□ 1.62
SPENQ96T58 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.15■■□□□ 1.62
SPENQ96T58 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.15■■□□□ 1.62
SPENQ96T58 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.15■■□□□ 1.62
SPENQ96T58 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.13■■□□□ 1.61
SPENQ96T58 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.12■■□□□ 1.61
SPENQ96T58 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SPENQ96T58 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.11■■□□□ 1.61
SPENQ96T58 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
SPENQ96T58 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPENQ96T58 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.1■■□□□ 1.61
SPENQ96T58 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms