Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
DDX53Q86TM3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX53Q86TM3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.02■■■□□ 2.4
DDX53Q86TM3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX53Q86TM3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.99■■■□□ 2.39
DDX53Q86TM3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
DDX53Q86TM3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
DDX53Q86TM3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
DDX53Q86TM3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.95■■■□□ 2.39
DDX53Q86TM3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX53Q86TM3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX53Q86TM3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX53Q86TM3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.91■■■□□ 2.38
DDX53Q86TM3 AP006261.1-201ENST00000584783 668 ntBASIC29.9■■■□□ 2.38
DDX53Q86TM3 AL162393.1-201ENST00000437852 946 ntBASIC29.89■■■□□ 2.38
DDX53Q86TM3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX53Q86TM3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.88■■■□□ 2.37
DDX53Q86TM3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX53Q86TM3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.87■■■□□ 2.37
DDX53Q86TM3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.86■■■□□ 2.37
DDX53Q86TM3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
DDX53Q86TM3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.84■■■□□ 2.37
DDX53Q86TM3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
DDX53Q86TM3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
DDX53Q86TM3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX53Q86TM3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX53Q86TM3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.81■■■□□ 2.36
DDX53Q86TM3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
DDX53Q86TM3 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.8■■■□□ 2.36
DDX53Q86TM3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX53Q86TM3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
DDX53Q86TM3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.79■■■□□ 2.36
DDX53Q86TM3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
DDX53Q86TM3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
DDX53Q86TM3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
DDX53Q86TM3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
DDX53Q86TM3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX53Q86TM3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
DDX53Q86TM3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX53Q86TM3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
DDX53Q86TM3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.73■■■□□ 2.35
DDX53Q86TM3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
DDX53Q86TM3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
DDX53Q86TM3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.71■■■□□ 2.35
DDX53Q86TM3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
DDX53Q86TM3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.67■■■□□ 2.34
DDX53Q86TM3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
DDX53Q86TM3 MIR3665-201ENST00000578708 105 ntBASIC29.66■■■□□ 2.34
DDX53Q86TM3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.65■■■□□ 2.34
DDX53Q86TM3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
DDX53Q86TM3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX53Q86TM3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
DDX53Q86TM3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.63■■■□□ 2.33
DDX53Q86TM3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.63■■■□□ 2.33
DDX53Q86TM3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX53Q86TM3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
DDX53Q86TM3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
DDX53Q86TM3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
DDX53Q86TM3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
DDX53Q86TM3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.58■■■□□ 2.33
DDX53Q86TM3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
DDX53Q86TM3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.58■■■□□ 2.33
DDX53Q86TM3 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.57■■■□□ 2.32
DDX53Q86TM3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
DDX53Q86TM3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.55■■■□□ 2.32
DDX53Q86TM3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.55■■■□□ 2.32
DDX53Q86TM3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.55■■■□□ 2.32
DDX53Q86TM3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX53Q86TM3 MIR762-201ENST00000390236 83 ntBASIC29.53■■■□□ 2.32
DDX53Q86TM3 DUX4L28-201ENST00000623687 678 ntBASIC29.53■■■□□ 2.32
DDX53Q86TM3 AC087741.3-201ENST00000624270 1347 ntBASIC29.51■■■□□ 2.32
DDX53Q86TM3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
DDX53Q86TM3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
DDX53Q86TM3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.47■■■□□ 2.31
DDX53Q86TM3 AC005559.1-201ENST00000589661 871 ntBASIC29.45■■■□□ 2.31
DDX53Q86TM3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
DDX53Q86TM3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.44■■■□□ 2.3
DDX53Q86TM3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
DDX53Q86TM3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.41■■■□□ 2.3
DDX53Q86TM3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.41■■■□□ 2.3
DDX53Q86TM3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
DDX53Q86TM3 ABHD17AP4-201ENST00000411545 909 ntBASIC29.39■■■□□ 2.3
DDX53Q86TM3 AC044849.2-201ENST00000606596 710 ntBASIC29.39■■■□□ 2.3
DDX53Q86TM3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.38■■■□□ 2.29
DDX53Q86TM3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
DDX53Q86TM3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
DDX53Q86TM3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
DDX53Q86TM3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.37■■■□□ 2.29
DDX53Q86TM3 WASH5P-204ENST00000632292 975 ntBASIC29.37■■■□□ 2.29
DDX53Q86TM3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
DDX53Q86TM3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.35■■■□□ 2.29
DDX53Q86TM3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
DDX53Q86TM3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
DDX53Q86TM3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.34■■■□□ 2.29
DDX53Q86TM3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
DDX53Q86TM3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
DDX53Q86TM3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
DDX53Q86TM3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
DDX53Q86TM3 MIR7108-201ENST00000614319 87 ntBASIC29.3■■■□□ 2.28
DDX53Q86TM3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms