Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHISA2Q6UWI4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SHISA2Q6UWI4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHISA2Q6UWI4 MIR3665-201ENST00000578708 105 ntBASIC22.1■■□□□ 1.13
SHISA2Q6UWI4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SHISA2Q6UWI4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.07■■□□□ 1.12
SHISA2Q6UWI4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.07■■□□□ 1.12
SHISA2Q6UWI4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.06■■□□□ 1.12
SHISA2Q6UWI4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHISA2Q6UWI4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.05■■□□□ 1.12
SHISA2Q6UWI4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SHISA2Q6UWI4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.03■■□□□ 1.12
SHISA2Q6UWI4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.01■■□□□ 1.11
SHISA2Q6UWI4 AL133380.1-201ENST00000506013 324 ntBASIC22■■□□□ 1.11
SHISA2Q6UWI4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22■■□□□ 1.11
SHISA2Q6UWI4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.99■■□□□ 1.11
SHISA2Q6UWI4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHISA2Q6UWI4 HLA-V-202ENST00000446817 847 ntBASIC21.97■■□□□ 1.11
SHISA2Q6UWI4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHISA2Q6UWI4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SHISA2Q6UWI4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.96■■□□□ 1.11
SHISA2Q6UWI4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHISA2Q6UWI4 AC145285.7-201ENST00000614819 1539 ntBASIC21.94■■□□□ 1.1
SHISA2Q6UWI4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHISA2Q6UWI4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.93■■□□□ 1.1
SHISA2Q6UWI4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SHISA2Q6UWI4 AC087741.3-201ENST00000624270 1347 ntBASIC21.92■■□□□ 1.1
SHISA2Q6UWI4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.92■■□□□ 1.1
SHISA2Q6UWI4 AC044849.2-201ENST00000606596 710 ntBASIC21.92■■□□□ 1.1
SHISA2Q6UWI4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SHISA2Q6UWI4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHISA2Q6UWI4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHISA2Q6UWI4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHISA2Q6UWI4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.89■■□□□ 1.09
SHISA2Q6UWI4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.88■■□□□ 1.09
SHISA2Q6UWI4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SHISA2Q6UWI4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHISA2Q6UWI4 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.86■■□□□ 1.09
SHISA2Q6UWI4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SHISA2Q6UWI4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHISA2Q6UWI4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.85■■□□□ 1.09
SHISA2Q6UWI4 DUX4L28-201ENST00000623687 678 ntBASIC21.84■■□□□ 1.09
SHISA2Q6UWI4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHISA2Q6UWI4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.81■■□□□ 1.08
SHISA2Q6UWI4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.81■■□□□ 1.08
SHISA2Q6UWI4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHISA2Q6UWI4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SHISA2Q6UWI4 AC005559.1-201ENST00000589661 871 ntBASIC21.79■■□□□ 1.08
SHISA2Q6UWI4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.79■■□□□ 1.08
SHISA2Q6UWI4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHISA2Q6UWI4 MIR762-201ENST00000390236 83 ntBASIC21.78■■□□□ 1.08
SHISA2Q6UWI4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.77■■□□□ 1.08
SHISA2Q6UWI4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SHISA2Q6UWI4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SHISA2Q6UWI4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SHISA2Q6UWI4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.75■■□□□ 1.07
SHISA2Q6UWI4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.74■■□□□ 1.07
SHISA2Q6UWI4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.74■■□□□ 1.07
SHISA2Q6UWI4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.74■■□□□ 1.07
SHISA2Q6UWI4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.73■■□□□ 1.07
SHISA2Q6UWI4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.72■■□□□ 1.07
SHISA2Q6UWI4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHISA2Q6UWI4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHISA2Q6UWI4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHISA2Q6UWI4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SHISA2Q6UWI4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.7■■□□□ 1.06
SHISA2Q6UWI4 ZNRF2P2-203ENST00000454624 420 ntBASIC21.7■■□□□ 1.06
SHISA2Q6UWI4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.7■■□□□ 1.06
SHISA2Q6UWI4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.7■■□□□ 1.06
SHISA2Q6UWI4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.69■■□□□ 1.06
SHISA2Q6UWI4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHISA2Q6UWI4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHISA2Q6UWI4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHISA2Q6UWI4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHISA2Q6UWI4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.67■■□□□ 1.06
SHISA2Q6UWI4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHISA2Q6UWI4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.65■■□□□ 1.06
SHISA2Q6UWI4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHISA2Q6UWI4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHISA2Q6UWI4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHISA2Q6UWI4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SHISA2Q6UWI4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHISA2Q6UWI4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SHISA2Q6UWI4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA2Q6UWI4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHISA2Q6UWI4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.55■■□□□ 1.04
SHISA2Q6UWI4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHISA2Q6UWI4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
SHISA2Q6UWI4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SHISA2Q6UWI4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
SHISA2Q6UWI4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.54■■□□□ 1.04
SHISA2Q6UWI4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHISA2Q6UWI4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.52■■□□□ 1.04
SHISA2Q6UWI4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SHISA2Q6UWI4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHISA2Q6UWI4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHISA2Q6UWI4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
SHISA2Q6UWI4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHISA2Q6UWI4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHISA2Q6UWI4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms