Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NFRKBQ6P4R8 RPS2P35-201ENST00000443417 897 ntBASIC31.53■■■□□ 2.64
NFRKBQ6P4R8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.63
NFRKBQ6P4R8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NFRKBQ6P4R8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
NFRKBQ6P4R8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NFRKBQ6P4R8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NFRKBQ6P4R8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
NFRKBQ6P4R8 CAHM-201ENST00000604200 896 ntBASIC31.45■■■□□ 2.63
NFRKBQ6P4R8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
NFRKBQ6P4R8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.39■■■□□ 2.62
NFRKBQ6P4R8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
NFRKBQ6P4R8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NFRKBQ6P4R8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NFRKBQ6P4R8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NFRKBQ6P4R8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
NFRKBQ6P4R8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NFRKBQ6P4R8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.34■■■□□ 2.61
NFRKBQ6P4R8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.33■■■□□ 2.61
NFRKBQ6P4R8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NFRKBQ6P4R8 AL391121.1-201ENST00000607967 1349 ntBASIC31.32■■■□□ 2.6
NFRKBQ6P4R8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.32■■■□□ 2.6
NFRKBQ6P4R8 AL133380.1-201ENST00000506013 324 ntBASIC31.31■■■□□ 2.6
NFRKBQ6P4R8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NFRKBQ6P4R8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
NFRKBQ6P4R8 AP006261.1-201ENST00000584783 668 ntBASIC31.24■■■□□ 2.59
NFRKBQ6P4R8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
NFRKBQ6P4R8 AL162393.1-201ENST00000437852 946 ntBASIC31.22■■■□□ 2.59
NFRKBQ6P4R8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.21■■■□□ 2.59
NFRKBQ6P4R8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.19■■■□□ 2.58
NFRKBQ6P4R8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NFRKBQ6P4R8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.18■■■□□ 2.58
NFRKBQ6P4R8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NFRKBQ6P4R8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NFRKBQ6P4R8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NFRKBQ6P4R8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
NFRKBQ6P4R8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.14■■■□□ 2.58
NFRKBQ6P4R8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NFRKBQ6P4R8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NFRKBQ6P4R8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NFRKBQ6P4R8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
NFRKBQ6P4R8 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.11■■■□□ 2.57
NFRKBQ6P4R8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.09■■■□□ 2.57
NFRKBQ6P4R8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.09■■■□□ 2.57
NFRKBQ6P4R8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NFRKBQ6P4R8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NFRKBQ6P4R8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
NFRKBQ6P4R8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
NFRKBQ6P4R8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NFRKBQ6P4R8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NFRKBQ6P4R8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.07■■■□□ 2.56
NFRKBQ6P4R8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
NFRKBQ6P4R8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NFRKBQ6P4R8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.06■■■□□ 2.56
NFRKBQ6P4R8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
NFRKBQ6P4R8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.05■■■□□ 2.56
NFRKBQ6P4R8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
NFRKBQ6P4R8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NFRKBQ6P4R8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
NFRKBQ6P4R8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
NFRKBQ6P4R8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NFRKBQ6P4R8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NFRKBQ6P4R8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
NFRKBQ6P4R8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.99■■■□□ 2.55
NFRKBQ6P4R8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.97■■■□□ 2.55
NFRKBQ6P4R8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
NFRKBQ6P4R8 MIR3665-201ENST00000578708 105 ntBASIC30.96■■■□□ 2.55
NFRKBQ6P4R8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.93■■■□□ 2.54
NFRKBQ6P4R8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NFRKBQ6P4R8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NFRKBQ6P4R8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.93■■■□□ 2.54
NFRKBQ6P4R8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
NFRKBQ6P4R8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.92■■■□□ 2.54
NFRKBQ6P4R8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.91■■■□□ 2.54
NFRKBQ6P4R8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.91■■■□□ 2.54
NFRKBQ6P4R8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
NFRKBQ6P4R8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
NFRKBQ6P4R8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
NFRKBQ6P4R8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NFRKBQ6P4R8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.86■■■□□ 2.53
NFRKBQ6P4R8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.86■■■□□ 2.53
NFRKBQ6P4R8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NFRKBQ6P4R8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NFRKBQ6P4R8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NFRKBQ6P4R8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
NFRKBQ6P4R8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
NFRKBQ6P4R8 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.84■■■□□ 2.53
NFRKBQ6P4R8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
NFRKBQ6P4R8 AC087741.3-201ENST00000624270 1347 ntBASIC30.81■■■□□ 2.52
NFRKBQ6P4R8 DUX4L28-201ENST00000623687 678 ntBASIC30.8■■■□□ 2.52
NFRKBQ6P4R8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NFRKBQ6P4R8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
NFRKBQ6P4R8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.79■■■□□ 2.52
NFRKBQ6P4R8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.79■■■□□ 2.52
NFRKBQ6P4R8 MIR762-201ENST00000390236 83 ntBASIC30.78■■■□□ 2.52
NFRKBQ6P4R8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
NFRKBQ6P4R8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NFRKBQ6P4R8 AC005559.1-201ENST00000589661 871 ntBASIC30.72■■■□□ 2.51
NFRKBQ6P4R8 ABHD17AP4-201ENST00000411545 909 ntBASIC30.71■■■□□ 2.51
NFRKBQ6P4R8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms