Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.55■■■■□ 3.76
NFRKBQ6P4R8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.07■■■■□ 3.68
NFRKBQ6P4R8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
NFRKBQ6P4R8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.49■■■■□ 3.59
NFRKBQ6P4R8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
NFRKBQ6P4R8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
NFRKBQ6P4R8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.1■■■■□ 3.53
NFRKBQ6P4R8 AL356512.1-201ENST00000607453 1739 ntBASIC36.85■■■■□ 3.49
NFRKBQ6P4R8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.46■■■■□ 3.43
NFRKBQ6P4R8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.27■■■■□ 3.4
NFRKBQ6P4R8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.18■■■■□ 3.38
NFRKBQ6P4R8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.12■■■■□ 3.37
NFRKBQ6P4R8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36■■■■□ 3.35
NFRKBQ6P4R8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.96■■■■□ 3.35
NFRKBQ6P4R8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.96■■■■□ 3.35
NFRKBQ6P4R8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
NFRKBQ6P4R8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.83■■■■□ 3.33
NFRKBQ6P4R8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.32
NFRKBQ6P4R8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
NFRKBQ6P4R8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.54■■■■□ 3.28
NFRKBQ6P4R8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
NFRKBQ6P4R8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.32■■■■□ 3.25
NFRKBQ6P4R8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
NFRKBQ6P4R8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.27■■■■□ 3.24
NFRKBQ6P4R8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
NFRKBQ6P4R8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
NFRKBQ6P4R8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
NFRKBQ6P4R8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.24■■■■□ 3.23
NFRKBQ6P4R8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.19■■■■□ 3.22
NFRKBQ6P4R8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.15■■■■□ 3.22
NFRKBQ6P4R8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
NFRKBQ6P4R8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.98■■■■□ 3.19
NFRKBQ6P4R8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
NFRKBQ6P4R8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.72■■■■□ 3.15
NFRKBQ6P4R8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NFRKBQ6P4R8 AC006077.2-201ENST00000623591 457 ntBASIC34.61■■■■□ 3.13
NFRKBQ6P4R8 ZNRF2P1-201ENST00000441407 443 ntBASIC34.56■■■■□ 3.12
NFRKBQ6P4R8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34.55■■■■□ 3.12
NFRKBQ6P4R8 AC015813.7-201ENST00000623294 581 ntBASIC34.51■■■■□ 3.12
NFRKBQ6P4R8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.43■■■■□ 3.1
NFRKBQ6P4R8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.3■■■■□ 3.08
NFRKBQ6P4R8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
NFRKBQ6P4R8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
NFRKBQ6P4R8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
NFRKBQ6P4R8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
NFRKBQ6P4R8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
NFRKBQ6P4R8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.1■■■■□ 3.05
NFRKBQ6P4R8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.08■■■■□ 3.05
NFRKBQ6P4R8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.04
NFRKBQ6P4R8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
NFRKBQ6P4R8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.95■■■■□ 3.03
NFRKBQ6P4R8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
NFRKBQ6P4R8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
NFRKBQ6P4R8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.81■■■■□ 3
NFRKBQ6P4R8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.78■■■■□ 3
NFRKBQ6P4R8 AP002365.1-201ENST00000603448 772 ntBASIC33.69■■■□□ 2.98
NFRKBQ6P4R8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.64■■■□□ 2.98
NFRKBQ6P4R8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
NFRKBQ6P4R8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
NFRKBQ6P4R8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.51■■■□□ 2.95
NFRKBQ6P4R8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
NFRKBQ6P4R8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
NFRKBQ6P4R8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.46■■■□□ 2.95
NFRKBQ6P4R8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.46■■■□□ 2.95
NFRKBQ6P4R8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
NFRKBQ6P4R8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.4■■■□□ 2.94
NFRKBQ6P4R8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.39■■■□□ 2.94
NFRKBQ6P4R8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
NFRKBQ6P4R8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
NFRKBQ6P4R8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
NFRKBQ6P4R8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.36■■■□□ 2.93
NFRKBQ6P4R8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
NFRKBQ6P4R8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
NFRKBQ6P4R8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.32■■■□□ 2.92
NFRKBQ6P4R8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.28■■■□□ 2.92
NFRKBQ6P4R8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.27■■■□□ 2.92
NFRKBQ6P4R8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
NFRKBQ6P4R8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.25■■■□□ 2.91
NFRKBQ6P4R8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.24■■■□□ 2.91
NFRKBQ6P4R8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
NFRKBQ6P4R8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
NFRKBQ6P4R8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.9
NFRKBQ6P4R8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
NFRKBQ6P4R8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
NFRKBQ6P4R8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
NFRKBQ6P4R8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
NFRKBQ6P4R8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
NFRKBQ6P4R8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
NFRKBQ6P4R8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.14■■■□□ 2.9
NFRKBQ6P4R8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
NFRKBQ6P4R8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.08■■■□□ 2.89
NFRKBQ6P4R8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.07■■■□□ 2.88
NFRKBQ6P4R8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
NFRKBQ6P4R8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.05■■■□□ 2.88
NFRKBQ6P4R8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.04■■■□□ 2.88
NFRKBQ6P4R8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
NFRKBQ6P4R8 DYNLL1-208ENST00000550178 581 ntBASIC33■■■□□ 2.87
NFRKBQ6P4R8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.96■■■□□ 2.87
NFRKBQ6P4R8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NFRKBQ6P4R8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms