Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SWSAP1Q6NVH7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.26■■■□□ 2.6
SWSAP1Q6NVH7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SWSAP1Q6NVH7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SWSAP1Q6NVH7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.24■■■□□ 2.59
SWSAP1Q6NVH7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.24■■■□□ 2.59
SWSAP1Q6NVH7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
SWSAP1Q6NVH7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
SWSAP1Q6NVH7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SWSAP1Q6NVH7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.18■■■□□ 2.58
SWSAP1Q6NVH7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SWSAP1Q6NVH7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.18■■■□□ 2.58
SWSAP1Q6NVH7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.17■■■□□ 2.58
SWSAP1Q6NVH7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SWSAP1Q6NVH7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SWSAP1Q6NVH7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SWSAP1Q6NVH7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SWSAP1Q6NVH7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.14■■■□□ 2.58
SWSAP1Q6NVH7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.14■■■□□ 2.58
SWSAP1Q6NVH7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.13■■■□□ 2.57
SWSAP1Q6NVH7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SWSAP1Q6NVH7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.11■■■□□ 2.57
SWSAP1Q6NVH7 AL133380.1-201ENST00000506013 324 ntBASIC31.1■■■□□ 2.57
SWSAP1Q6NVH7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.08■■■□□ 2.57
SWSAP1Q6NVH7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SWSAP1Q6NVH7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.06■■■□□ 2.56
SWSAP1Q6NVH7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SWSAP1Q6NVH7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SWSAP1Q6NVH7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
SWSAP1Q6NVH7 SUZ12P1-203ENST00000578195 985 ntBASIC31.02■■■□□ 2.56
SWSAP1Q6NVH7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.01■■■□□ 2.55
SWSAP1Q6NVH7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SWSAP1Q6NVH7 CAHM-201ENST00000604200 896 ntBASIC31■■■□□ 2.55
SWSAP1Q6NVH7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SWSAP1Q6NVH7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SWSAP1Q6NVH7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SWSAP1Q6NVH7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SWSAP1Q6NVH7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SWSAP1Q6NVH7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
SWSAP1Q6NVH7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.96■■■□□ 2.55
SWSAP1Q6NVH7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.95■■■□□ 2.55
SWSAP1Q6NVH7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
SWSAP1Q6NVH7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SWSAP1Q6NVH7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SWSAP1Q6NVH7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SWSAP1Q6NVH7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SWSAP1Q6NVH7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SWSAP1Q6NVH7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.9■■■□□ 2.54
SWSAP1Q6NVH7 AL391121.1-201ENST00000607967 1349 ntBASIC30.89■■■□□ 2.54
SWSAP1Q6NVH7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
SWSAP1Q6NVH7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SWSAP1Q6NVH7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.86■■■□□ 2.53
SWSAP1Q6NVH7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
SWSAP1Q6NVH7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.86■■■□□ 2.53
SWSAP1Q6NVH7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SWSAP1Q6NVH7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SWSAP1Q6NVH7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SWSAP1Q6NVH7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SWSAP1Q6NVH7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SWSAP1Q6NVH7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
SWSAP1Q6NVH7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SWSAP1Q6NVH7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SWSAP1Q6NVH7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SWSAP1Q6NVH7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
SWSAP1Q6NVH7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.78■■■□□ 2.52
SWSAP1Q6NVH7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SWSAP1Q6NVH7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SWSAP1Q6NVH7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
SWSAP1Q6NVH7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
SWSAP1Q6NVH7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.73■■■□□ 2.51
SWSAP1Q6NVH7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.72■■■□□ 2.51
SWSAP1Q6NVH7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SWSAP1Q6NVH7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.71■■■□□ 2.51
SWSAP1Q6NVH7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
SWSAP1Q6NVH7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
SWSAP1Q6NVH7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SWSAP1Q6NVH7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SWSAP1Q6NVH7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.66■■■□□ 2.5
SWSAP1Q6NVH7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.66■■■□□ 2.5
SWSAP1Q6NVH7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SWSAP1Q6NVH7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
SWSAP1Q6NVH7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SWSAP1Q6NVH7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SWSAP1Q6NVH7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SWSAP1Q6NVH7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SWSAP1Q6NVH7 WASH5P-204ENST00000632292 975 ntBASIC30.61■■■□□ 2.49
SWSAP1Q6NVH7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SWSAP1Q6NVH7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SWSAP1Q6NVH7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SWSAP1Q6NVH7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.59■■■□□ 2.49
SWSAP1Q6NVH7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SWSAP1Q6NVH7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.58■■■□□ 2.49
SWSAP1Q6NVH7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SWSAP1Q6NVH7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SWSAP1Q6NVH7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SWSAP1Q6NVH7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
SWSAP1Q6NVH7 RPS2P35-201ENST00000443417 897 ntBASIC30.54■■■□□ 2.48
SWSAP1Q6NVH7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.54■■■□□ 2.48
SWSAP1Q6NVH7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SWSAP1Q6NVH7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms