Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL391121.1-201ENST00000607967 1349 ntBASIC36.06■■■■□ 3.36
COL15A1P39059 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.05■■■■□ 3.36
COL15A1P39059 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
COL15A1P39059 AL133380.1-201ENST00000506013 324 ntBASIC36.03■■■■□ 3.36
COL15A1P39059 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
COL15A1P39059 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.03■■■■□ 3.36
COL15A1P39059 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
COL15A1P39059 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC36.01■■■■□ 3.36
COL15A1P39059 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC36.01■■■■□ 3.35
COL15A1P39059 NRG1-221ENST00000614767 762 ntTSL 5 BASIC36■■■■□ 3.35
COL15A1P39059 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
COL15A1P39059 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.98■■■■□ 3.35
COL15A1P39059 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
COL15A1P39059 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC35.98■■■■□ 3.35
COL15A1P39059 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
COL15A1P39059 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.94■■■■□ 3.34
COL15A1P39059 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC35.93■■■■□ 3.34
COL15A1P39059 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
COL15A1P39059 AP006261.1-201ENST00000584783 668 ntBASIC35.91■■■■□ 3.34
COL15A1P39059 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
COL15A1P39059 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC35.84■■■■□ 3.33
COL15A1P39059 HNRNPLP2-201ENST00000568980 1570 ntBASIC35.84■■■■□ 3.33
COL15A1P39059 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
COL15A1P39059 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
COL15A1P39059 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
COL15A1P39059 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.78■■■■□ 3.32
COL15A1P39059 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.77■■■■□ 3.32
COL15A1P39059 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
COL15A1P39059 EBPL-202ENST00000378268 680 ntTSL 3 BASIC35.74■■■■□ 3.31
COL15A1P39059 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC35.73■■■■□ 3.31
COL15A1P39059 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC35.7■■■■□ 3.31
COL15A1P39059 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.7■■■■□ 3.31
COL15A1P39059 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC35.66■■■■□ 3.3
COL15A1P39059 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.65■■■■□ 3.3
COL15A1P39059 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
COL15A1P39059 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
COL15A1P39059 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC35.64■■■■□ 3.3
COL15A1P39059 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.64■■■■□ 3.3
COL15A1P39059 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
COL15A1P39059 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC35.64■■■■□ 3.3
COL15A1P39059 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
COL15A1P39059 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
COL15A1P39059 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC35.62■■■■□ 3.29
COL15A1P39059 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
COL15A1P39059 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC35.61■■■■□ 3.29
COL15A1P39059 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
COL15A1P39059 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC35.6■■■■□ 3.29
COL15A1P39059 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
COL15A1P39059 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.29
COL15A1P39059 MIR3665-201ENST00000578708 105 ntBASIC35.57■■■■□ 3.28
COL15A1P39059 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
COL15A1P39059 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
COL15A1P39059 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.56■■■■□ 3.28
COL15A1P39059 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
COL15A1P39059 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
COL15A1P39059 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
COL15A1P39059 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
COL15A1P39059 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.53■■■■□ 3.28
COL15A1P39059 DUX4L28-201ENST00000623687 678 ntBASIC35.51■■■■□ 3.28
COL15A1P39059 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
COL15A1P39059 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.51■■■■□ 3.27
COL15A1P39059 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC35.51■■■■□ 3.27
COL15A1P39059 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
COL15A1P39059 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC35.48■■■■□ 3.27
COL15A1P39059 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
COL15A1P39059 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
COL15A1P39059 AC087741.3-201ENST00000624270 1347 ntBASIC35.47■■■■□ 3.27
COL15A1P39059 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
COL15A1P39059 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
COL15A1P39059 MIR762-201ENST00000390236 83 ntBASIC35.39■■■■□ 3.26
COL15A1P39059 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
COL15A1P39059 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.38■■■■□ 3.26
COL15A1P39059 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
COL15A1P39059 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
COL15A1P39059 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC35.36■■■■□ 3.25
COL15A1P39059 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
COL15A1P39059 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC35.34■■■■□ 3.25
COL15A1P39059 ABHD17AP4-201ENST00000411545 909 ntBASIC35.34■■■■□ 3.25
COL15A1P39059 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
COL15A1P39059 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC35.33■■■■□ 3.25
COL15A1P39059 MIR7108-201ENST00000614319 87 ntBASIC35.33■■■■□ 3.25
COL15A1P39059 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.32■■■■□ 3.24
COL15A1P39059 AC005559.1-201ENST00000589661 871 ntBASIC35.32■■■■□ 3.24
COL15A1P39059 AC044849.2-201ENST00000606596 710 ntBASIC35.32■■■■□ 3.24
COL15A1P39059 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
COL15A1P39059 MLEC-202ENST00000412616 841 ntTSL 3 BASIC35.3■■■■□ 3.24
COL15A1P39059 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
COL15A1P39059 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC35.27■■■■□ 3.24
COL15A1P39059 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
COL15A1P39059 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.25■■■■□ 3.23
COL15A1P39059 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
COL15A1P39059 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.23■■■■□ 3.23
COL15A1P39059 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.2■■■■□ 3.23
COL15A1P39059 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
COL15A1P39059 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.18■■■■□ 3.22
COL15A1P39059 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
COL15A1P39059 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.15■■■■□ 3.22
COL15A1P39059 PVT1-219ENST00000523427 938 ntTSL 3 BASIC35.14■■■■□ 3.22
COL15A1P39059 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.14■■■■□ 3.22
COL15A1P39059 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms