Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CTNND1O60716 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
CTNND1O60716 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC33.1■■■□□ 2.89
CTNND1O60716 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
CTNND1O60716 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.07■■■□□ 2.88
CTNND1O60716 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CTNND1O60716 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CTNND1O60716 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
CTNND1O60716 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CTNND1O60716 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CTNND1O60716 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC33.01■■■□□ 2.88
CTNND1O60716 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CTNND1O60716 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CTNND1O60716 AP006261.1-201ENST00000584783 668 ntBASIC32.97■■■□□ 2.87
CTNND1O60716 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.97■■■□□ 2.87
CTNND1O60716 AL162393.1-201ENST00000437852 946 ntBASIC32.96■■■□□ 2.87
CTNND1O60716 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.95■■■□□ 2.87
CTNND1O60716 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CTNND1O60716 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.94■■■□□ 2.86
CTNND1O60716 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CTNND1O60716 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.92■■■□□ 2.86
CTNND1O60716 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.88■■■□□ 2.85
CTNND1O60716 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CTNND1O60716 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
CTNND1O60716 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CTNND1O60716 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CTNND1O60716 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.86■■■□□ 2.85
CTNND1O60716 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CTNND1O60716 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.86■■■□□ 2.85
CTNND1O60716 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CTNND1O60716 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.85■■■□□ 2.85
CTNND1O60716 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CTNND1O60716 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CTNND1O60716 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CTNND1O60716 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CTNND1O60716 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
CTNND1O60716 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
CTNND1O60716 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
CTNND1O60716 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CTNND1O60716 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CTNND1O60716 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CTNND1O60716 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CTNND1O60716 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CTNND1O60716 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.77■■■□□ 2.84
CTNND1O60716 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CTNND1O60716 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.75■■■□□ 2.83
CTNND1O60716 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.72■■■□□ 2.83
CTNND1O60716 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CTNND1O60716 MIR3665-201ENST00000578708 105 ntBASIC32.7■■■□□ 2.83
CTNND1O60716 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.69■■■□□ 2.82
CTNND1O60716 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
CTNND1O60716 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CTNND1O60716 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CTNND1O60716 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CTNND1O60716 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CTNND1O60716 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.66■■■□□ 2.82
CTNND1O60716 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.66■■■□□ 2.82
CTNND1O60716 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
CTNND1O60716 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CTNND1O60716 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
CTNND1O60716 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.62■■■□□ 2.81
CTNND1O60716 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
CTNND1O60716 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.61■■■□□ 2.81
CTNND1O60716 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.6■■■□□ 2.81
CTNND1O60716 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.6■■■□□ 2.81
CTNND1O60716 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CTNND1O60716 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.58■■■□□ 2.81
CTNND1O60716 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CTNND1O60716 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.57■■■□□ 2.8
CTNND1O60716 MIR762-201ENST00000390236 83 ntBASIC32.56■■■□□ 2.8
CTNND1O60716 DUX4L28-201ENST00000623687 678 ntBASIC32.56■■■□□ 2.8
CTNND1O60716 AC087741.3-201ENST00000624270 1347 ntBASIC32.55■■■□□ 2.8
CTNND1O60716 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CTNND1O60716 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
CTNND1O60716 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.49■■■□□ 2.79
CTNND1O60716 AC005559.1-201ENST00000589661 871 ntBASIC32.47■■■□□ 2.79
CTNND1O60716 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CTNND1O60716 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CTNND1O60716 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.44■■■□□ 2.78
CTNND1O60716 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CTNND1O60716 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.43■■■□□ 2.78
CTNND1O60716 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.42■■■□□ 2.78
CTNND1O60716 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
CTNND1O60716 ABHD17AP4-201ENST00000411545 909 ntBASIC32.41■■■□□ 2.78
CTNND1O60716 AC044849.2-201ENST00000606596 710 ntBASIC32.4■■■□□ 2.78
CTNND1O60716 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.39■■■□□ 2.78
CTNND1O60716 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
CTNND1O60716 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CTNND1O60716 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CTNND1O60716 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.37■■■□□ 2.77
CTNND1O60716 WASH5P-204ENST00000632292 975 ntBASIC32.37■■■□□ 2.77
CTNND1O60716 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CTNND1O60716 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.35■■■□□ 2.77
CTNND1O60716 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
CTNND1O60716 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CTNND1O60716 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CTNND1O60716 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.34■■■□□ 2.77
CTNND1O60716 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
CTNND1O60716 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
CTNND1O60716 MIR7108-201ENST00000614319 87 ntBASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms