Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NACAE9PAV3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NACAE9PAV3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NACAE9PAV3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NACAE9PAV3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.04■□□□□ 0.8
NACAE9PAV3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NACAE9PAV3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NACAE9PAV3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.02■□□□□ 0.8
NACAE9PAV3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NACAE9PAV3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NACAE9PAV3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20■□□□□ 0.79
NACAE9PAV3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20■□□□□ 0.79
NACAE9PAV3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
NACAE9PAV3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NACAE9PAV3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NACAE9PAV3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NACAE9PAV3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.95■□□□□ 0.78
NACAE9PAV3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.95■□□□□ 0.78
NACAE9PAV3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NACAE9PAV3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NACAE9PAV3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NACAE9PAV3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NACAE9PAV3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NACAE9PAV3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.91■□□□□ 0.78
NACAE9PAV3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.91■□□□□ 0.78
NACAE9PAV3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NACAE9PAV3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
NACAE9PAV3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.9■□□□□ 0.78
NACAE9PAV3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NACAE9PAV3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NACAE9PAV3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NACAE9PAV3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NACAE9PAV3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NACAE9PAV3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NACAE9PAV3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NACAE9PAV3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NACAE9PAV3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.86■□□□□ 0.77
NACAE9PAV3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.86■□□□□ 0.77
NACAE9PAV3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NACAE9PAV3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NACAE9PAV3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.82■□□□□ 0.76
NACAE9PAV3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NACAE9PAV3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NACAE9PAV3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NACAE9PAV3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.8■□□□□ 0.76
NACAE9PAV3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.79■□□□□ 0.76
NACAE9PAV3 AL031258.1-201ENST00000623562 325 ntBASIC19.79■□□□□ 0.76
NACAE9PAV3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NACAE9PAV3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NACAE9PAV3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NACAE9PAV3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NACAE9PAV3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NACAE9PAV3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.78■□□□□ 0.76
NACAE9PAV3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NACAE9PAV3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NACAE9PAV3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.76■□□□□ 0.75
NACAE9PAV3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.76■□□□□ 0.75
NACAE9PAV3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NACAE9PAV3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NACAE9PAV3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NACAE9PAV3 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.74■□□□□ 0.75
NACAE9PAV3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NACAE9PAV3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.74■□□□□ 0.75
NACAE9PAV3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.74■□□□□ 0.75
NACAE9PAV3 AC120057.4-201ENST00000624722 1615 ntBASIC19.73■□□□□ 0.75
NACAE9PAV3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.73■□□□□ 0.75
NACAE9PAV3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NACAE9PAV3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.73■□□□□ 0.75
NACAE9PAV3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NACAE9PAV3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.72■□□□□ 0.75
NACAE9PAV3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NACAE9PAV3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NACAE9PAV3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NACAE9PAV3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NACAE9PAV3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.71■□□□□ 0.75
NACAE9PAV3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NACAE9PAV3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.7■□□□□ 0.74
NACAE9PAV3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NACAE9PAV3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
NACAE9PAV3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NACAE9PAV3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NACAE9PAV3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.68■□□□□ 0.74
NACAE9PAV3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.67■□□□□ 0.74
NACAE9PAV3 RARRES2P7-201ENST00000567349 469 ntBASIC19.67■□□□□ 0.74
NACAE9PAV3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NACAE9PAV3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.66■□□□□ 0.74
NACAE9PAV3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NACAE9PAV3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.63■□□□□ 0.73
NACAE9PAV3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NACAE9PAV3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NACAE9PAV3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NACAE9PAV3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NACAE9PAV3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NACAE9PAV3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NACAE9PAV3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NACAE9PAV3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NACAE9PAV3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.59■□□□□ 0.73
NACAE9PAV3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NACAE9PAV3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.58■□□□□ 0.72
NACAE9PAV3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms