Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CDHR4A6H8M9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CDHR4A6H8M9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDHR4A6H8M9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDHR4A6H8M9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDHR4A6H8M9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDHR4A6H8M9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.54■■□□□ 1.68
CDHR4A6H8M9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDHR4A6H8M9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDHR4A6H8M9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CDHR4A6H8M9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.54■■□□□ 1.68
CDHR4A6H8M9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.53■■□□□ 1.68
CDHR4A6H8M9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CDHR4A6H8M9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDHR4A6H8M9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CDHR4A6H8M9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDHR4A6H8M9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDHR4A6H8M9 AP002365.1-201ENST00000603448 772 ntBASIC25.51■■□□□ 1.67
CDHR4A6H8M9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDHR4A6H8M9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.5■■□□□ 1.67
CDHR4A6H8M9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CDHR4A6H8M9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDHR4A6H8M9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDHR4A6H8M9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
CDHR4A6H8M9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.48■■□□□ 1.67
CDHR4A6H8M9 AL031258.1-201ENST00000623562 325 ntBASIC25.48■■□□□ 1.67
CDHR4A6H8M9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDHR4A6H8M9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.47■■□□□ 1.67
CDHR4A6H8M9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.47■■□□□ 1.67
CDHR4A6H8M9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDHR4A6H8M9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDHR4A6H8M9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.45■■□□□ 1.66
CDHR4A6H8M9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.45■■□□□ 1.66
CDHR4A6H8M9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDHR4A6H8M9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CDHR4A6H8M9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.42■■□□□ 1.66
CDHR4A6H8M9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDHR4A6H8M9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDHR4A6H8M9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDHR4A6H8M9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDHR4A6H8M9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.4■■□□□ 1.66
CDHR4A6H8M9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.4■■□□□ 1.66
CDHR4A6H8M9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CDHR4A6H8M9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.38■■□□□ 1.65
CDHR4A6H8M9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDHR4A6H8M9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.38■■□□□ 1.65
CDHR4A6H8M9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CDHR4A6H8M9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDHR4A6H8M9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDHR4A6H8M9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDHR4A6H8M9 AC120057.4-201ENST00000624722 1615 ntBASIC25.36■■□□□ 1.65
CDHR4A6H8M9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.35■■□□□ 1.65
CDHR4A6H8M9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDHR4A6H8M9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDHR4A6H8M9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.32■■□□□ 1.64
CDHR4A6H8M9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDHR4A6H8M9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.3■■□□□ 1.64
CDHR4A6H8M9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDHR4A6H8M9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.26■■□□□ 1.63
CDHR4A6H8M9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDHR4A6H8M9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.25■■□□□ 1.63
CDHR4A6H8M9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDHR4A6H8M9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDHR4A6H8M9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDHR4A6H8M9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CDHR4A6H8M9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.22■■□□□ 1.63
CDHR4A6H8M9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDHR4A6H8M9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDHR4A6H8M9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.21■■□□□ 1.63
CDHR4A6H8M9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDHR4A6H8M9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDHR4A6H8M9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CDHR4A6H8M9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CDHR4A6H8M9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CDHR4A6H8M9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDHR4A6H8M9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDHR4A6H8M9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDHR4A6H8M9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDHR4A6H8M9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDHR4A6H8M9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
CDHR4A6H8M9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDHR4A6H8M9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.13■■□□□ 1.61
CDHR4A6H8M9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDHR4A6H8M9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDHR4A6H8M9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.12■■□□□ 1.61
CDHR4A6H8M9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDHR4A6H8M9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDHR4A6H8M9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.11■■□□□ 1.61
CDHR4A6H8M9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.1■■□□□ 1.61
CDHR4A6H8M9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.1■■□□□ 1.61
CDHR4A6H8M9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.1■■□□□ 1.61
CDHR4A6H8M9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CDHR4A6H8M9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDHR4A6H8M9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDHR4A6H8M9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDHR4A6H8M9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDHR4A6H8M9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDHR4A6H8M9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDHR4A6H8M9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.06■■□□□ 1.6
CDHR4A6H8M9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms