Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV20A0A0B4J274 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV20A0A0B4J274 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.33■■□□□ 1.33
TRAV20A0A0B4J274 AC136428.2-201ENST00000563187 214 ntBASIC23.33■■□□□ 1.33
TRAV20A0A0B4J274 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRAV20A0A0B4J274 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.31■■□□□ 1.32
TRAV20A0A0B4J274 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV20A0A0B4J274 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV20A0A0B4J274 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.28■■□□□ 1.32
TRAV20A0A0B4J274 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV20A0A0B4J274 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRAV20A0A0B4J274 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRAV20A0A0B4J274 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRAV20A0A0B4J274 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
TRAV20A0A0B4J274 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRAV20A0A0B4J274 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.22■■□□□ 1.31
TRAV20A0A0B4J274 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.21■■□□□ 1.31
TRAV20A0A0B4J274 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TRAV20A0A0B4J274 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAV20A0A0B4J274 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.19■■□□□ 1.3
TRAV20A0A0B4J274 SUZ12P1-203ENST00000578195 985 ntBASIC23.19■■□□□ 1.3
TRAV20A0A0B4J274 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV20A0A0B4J274 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.17■■□□□ 1.3
TRAV20A0A0B4J274 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV20A0A0B4J274 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV20A0A0B4J274 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.16■■□□□ 1.3
TRAV20A0A0B4J274 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRAV20A0A0B4J274 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV20A0A0B4J274 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV20A0A0B4J274 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAV20A0A0B4J274 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV20A0A0B4J274 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV20A0A0B4J274 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRAV20A0A0B4J274 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.09■■□□□ 1.29
TRAV20A0A0B4J274 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV20A0A0B4J274 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV20A0A0B4J274 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TRAV20A0A0B4J274 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV20A0A0B4J274 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAV20A0A0B4J274 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV20A0A0B4J274 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV20A0A0B4J274 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAV20A0A0B4J274 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.05■■□□□ 1.28
TRAV20A0A0B4J274 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAV20A0A0B4J274 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAV20A0A0B4J274 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAV20A0A0B4J274 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV20A0A0B4J274 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAV20A0A0B4J274 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV20A0A0B4J274 AL133380.1-201ENST00000506013 324 ntBASIC23.02■■□□□ 1.28
TRAV20A0A0B4J274 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV20A0A0B4J274 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAV20A0A0B4J274 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAV20A0A0B4J274 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAV20A0A0B4J274 CAHM-201ENST00000604200 896 ntBASIC23.01■■□□□ 1.27
TRAV20A0A0B4J274 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
TRAV20A0A0B4J274 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.99■■□□□ 1.27
TRAV20A0A0B4J274 AL391121.1-201ENST00000607967 1349 ntBASIC22.98■■□□□ 1.27
TRAV20A0A0B4J274 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.97■■□□□ 1.27
TRAV20A0A0B4J274 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV20A0A0B4J274 RPS2P35-201ENST00000443417 897 ntBASIC22.97■■□□□ 1.27
TRAV20A0A0B4J274 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC22.97■■□□□ 1.27
TRAV20A0A0B4J274 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.96■■□□□ 1.27
TRAV20A0A0B4J274 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAV20A0A0B4J274 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRAV20A0A0B4J274 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRAV20A0A0B4J274 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRAV20A0A0B4J274 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
TRAV20A0A0B4J274 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV20A0A0B4J274 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRAV20A0A0B4J274 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV20A0A0B4J274 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV20A0A0B4J274 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV20A0A0B4J274 AP006261.1-201ENST00000584783 668 ntBASIC22.91■■□□□ 1.26
TRAV20A0A0B4J274 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV20A0A0B4J274 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
TRAV20A0A0B4J274 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
TRAV20A0A0B4J274 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRAV20A0A0B4J274 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
TRAV20A0A0B4J274 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRAV20A0A0B4J274 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRAV20A0A0B4J274 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.86■■□□□ 1.25
TRAV20A0A0B4J274 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV20A0A0B4J274 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.85■■□□□ 1.25
TRAV20A0A0B4J274 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV20A0A0B4J274 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.83■■□□□ 1.25
TRAV20A0A0B4J274 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.81■■□□□ 1.24
TRAV20A0A0B4J274 AL162393.1-201ENST00000437852 946 ntBASIC22.81■■□□□ 1.24
TRAV20A0A0B4J274 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TRAV20A0A0B4J274 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRAV20A0A0B4J274 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRAV20A0A0B4J274 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRAV20A0A0B4J274 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.78■■□□□ 1.24
TRAV20A0A0B4J274 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV20A0A0B4J274 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV20A0A0B4J274 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.76■■□□□ 1.23
TRAV20A0A0B4J274 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.76■■□□□ 1.23
TRAV20A0A0B4J274 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.74■■□□□ 1.23
TRAV20A0A0B4J274 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV20A0A0B4J274 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms