Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.87■■□□□ 1.89
CCDC187A0A096LP49 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC187A0A096LP49 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC187A0A096LP49 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CCDC187A0A096LP49 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC187A0A096LP49 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CCDC187A0A096LP49 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.83■■□□□ 1.89
CCDC187A0A096LP49 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.81■■□□□ 1.88
CCDC187A0A096LP49 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC187A0A096LP49 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CCDC187A0A096LP49 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.78■■□□□ 1.88
CCDC187A0A096LP49 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.78■■□□□ 1.88
CCDC187A0A096LP49 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC187A0A096LP49 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.76■■□□□ 1.87
CCDC187A0A096LP49 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.75■■□□□ 1.87
CCDC187A0A096LP49 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CCDC187A0A096LP49 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.73■■□□□ 1.87
CCDC187A0A096LP49 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC187A0A096LP49 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.73■■□□□ 1.87
CCDC187A0A096LP49 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC187A0A096LP49 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.72■■□□□ 1.87
CCDC187A0A096LP49 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC187A0A096LP49 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC187A0A096LP49 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.69■■□□□ 1.86
CCDC187A0A096LP49 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
CCDC187A0A096LP49 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.67■■□□□ 1.86
CCDC187A0A096LP49 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.66■■□□□ 1.86
CCDC187A0A096LP49 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC187A0A096LP49 MIR3665-201ENST00000578708 105 ntBASIC26.66■■□□□ 1.86
CCDC187A0A096LP49 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CCDC187A0A096LP49 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.63■■□□□ 1.85
CCDC187A0A096LP49 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC187A0A096LP49 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC187A0A096LP49 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC187A0A096LP49 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC187A0A096LP49 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CCDC187A0A096LP49 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC187A0A096LP49 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CCDC187A0A096LP49 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC187A0A096LP49 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC187A0A096LP49 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC187A0A096LP49 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
CCDC187A0A096LP49 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC187A0A096LP49 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC187A0A096LP49 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC187A0A096LP49 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC187A0A096LP49 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC187A0A096LP49 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.52■■□□□ 1.84
CCDC187A0A096LP49 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC187A0A096LP49 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC187A0A096LP49 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC187A0A096LP49 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC187A0A096LP49 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC187A0A096LP49 AC087741.3-201ENST00000624270 1347 ntBASIC26.5■■□□□ 1.83
CCDC187A0A096LP49 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC187A0A096LP49 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC187A0A096LP49 DUX4L28-201ENST00000623687 678 ntBASIC26.49■■□□□ 1.83
CCDC187A0A096LP49 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.48■■□□□ 1.83
CCDC187A0A096LP49 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.48■■□□□ 1.83
CCDC187A0A096LP49 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC187A0A096LP49 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC187A0A096LP49 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC187A0A096LP49 MIR762-201ENST00000390236 83 ntBASIC26.47■■□□□ 1.83
CCDC187A0A096LP49 ABHD17AP4-201ENST00000411545 909 ntBASIC26.47■■□□□ 1.83
CCDC187A0A096LP49 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC187A0A096LP49 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.45■■□□□ 1.82
CCDC187A0A096LP49 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC187A0A096LP49 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC187A0A096LP49 AC044849.2-201ENST00000606596 710 ntBASIC26.44■■□□□ 1.82
CCDC187A0A096LP49 MIR7108-201ENST00000614319 87 ntBASIC26.44■■□□□ 1.82
CCDC187A0A096LP49 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCDC187A0A096LP49 AC005559.1-201ENST00000589661 871 ntBASIC26.43■■□□□ 1.82
CCDC187A0A096LP49 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC187A0A096LP49 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.4■■□□□ 1.82
CCDC187A0A096LP49 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.4■■□□□ 1.82
CCDC187A0A096LP49 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.37■■□□□ 1.81
CCDC187A0A096LP49 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CCDC187A0A096LP49 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC187A0A096LP49 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CCDC187A0A096LP49 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC187A0A096LP49 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC187A0A096LP49 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CCDC187A0A096LP49 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC187A0A096LP49 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CCDC187A0A096LP49 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC187A0A096LP49 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC187A0A096LP49 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC187A0A096LP49 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.28■■□□□ 1.8
CCDC187A0A096LP49 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC187A0A096LP49 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CCDC187A0A096LP49 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC187A0A096LP49 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC187A0A096LP49 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC187A0A096LP49 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CCDC187A0A096LP49 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CCDC187A0A096LP49 WASH5P-204ENST00000632292 975 ntBASIC26.22■■□□□ 1.79
CCDC187A0A096LP49 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC187A0A096LP49 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC187A0A096LP49 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC187A0A096LP49 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms