Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.07■■■□□ 2.89
CCDC187A0A096LP49 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.73■■■□□ 2.83
CCDC187A0A096LP49 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.25■■■□□ 2.75
CCDC187A0A096LP49 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CCDC187A0A096LP49 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CCDC187A0A096LP49 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
CCDC187A0A096LP49 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC187A0A096LP49 AL356512.1-201ENST00000607453 1739 ntBASIC31.56■■■□□ 2.64
CCDC187A0A096LP49 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CCDC187A0A096LP49 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.24■■■□□ 2.59
CCDC187A0A096LP49 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.07■■■□□ 2.56
CCDC187A0A096LP49 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.06■■■□□ 2.56
CCDC187A0A096LP49 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC187A0A096LP49 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC187A0A096LP49 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
CCDC187A0A096LP49 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC187A0A096LP49 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC187A0A096LP49 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC187A0A096LP49 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC187A0A096LP49 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC187A0A096LP49 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC187A0A096LP49 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC187A0A096LP49 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
CCDC187A0A096LP49 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.3■■■□□ 2.44
CCDC187A0A096LP49 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CCDC187A0A096LP49 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCDC187A0A096LP49 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.2■■■□□ 2.43
CCDC187A0A096LP49 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCDC187A0A096LP49 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.1■■■□□ 2.41
CCDC187A0A096LP49 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC187A0A096LP49 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CCDC187A0A096LP49 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
CCDC187A0A096LP49 AC006077.2-201ENST00000623591 457 ntBASIC29.78■■■□□ 2.36
CCDC187A0A096LP49 ZNRF2P1-201ENST00000441407 443 ntBASIC29.76■■■□□ 2.35
CCDC187A0A096LP49 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.75■■■□□ 2.35
CCDC187A0A096LP49 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC187A0A096LP49 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.67■■■□□ 2.34
CCDC187A0A096LP49 AC015813.7-201ENST00000623294 581 ntBASIC29.63■■■□□ 2.33
CCDC187A0A096LP49 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC187A0A096LP49 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.43■■■□□ 2.3
CCDC187A0A096LP49 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC187A0A096LP49 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC187A0A096LP49 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC187A0A096LP49 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC187A0A096LP49 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC187A0A096LP49 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC187A0A096LP49 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CCDC187A0A096LP49 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.05■■■□□ 2.24
CCDC187A0A096LP49 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CCDC187A0A096LP49 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.03■■■□□ 2.24
CCDC187A0A096LP49 AP002365.1-201ENST00000603448 772 ntBASIC29.02■■■□□ 2.24
CCDC187A0A096LP49 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCDC187A0A096LP49 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.8■■■□□ 2.2
CCDC187A0A096LP49 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC187A0A096LP49 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC187A0A096LP49 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.78■■■□□ 2.2
CCDC187A0A096LP49 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC187A0A096LP49 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.77■■■□□ 2.2
CCDC187A0A096LP49 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC187A0A096LP49 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC187A0A096LP49 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
CCDC187A0A096LP49 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.69■■■□□ 2.18
CCDC187A0A096LP49 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.66■■■□□ 2.18
CCDC187A0A096LP49 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CCDC187A0A096LP49 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC187A0A096LP49 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.64■■■□□ 2.18
CCDC187A0A096LP49 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC187A0A096LP49 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.58■■■□□ 2.17
CCDC187A0A096LP49 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CCDC187A0A096LP49 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCDC187A0A096LP49 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCDC187A0A096LP49 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
CCDC187A0A096LP49 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC187A0A096LP49 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
CCDC187A0A096LP49 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CCDC187A0A096LP49 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.44■■■□□ 2.14
CCDC187A0A096LP49 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.42■■■□□ 2.14
CCDC187A0A096LP49 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC187A0A096LP49 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.41■■■□□ 2.14
CCDC187A0A096LP49 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC187A0A096LP49 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC187A0A096LP49 DYNLL1-208ENST00000550178 581 ntBASIC28.36■■■□□ 2.13
CCDC187A0A096LP49 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
CCDC187A0A096LP49 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CCDC187A0A096LP49 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC187A0A096LP49 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.3■■■□□ 2.12
CCDC187A0A096LP49 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC187A0A096LP49 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.25■■■□□ 2.11
CCDC187A0A096LP49 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.23■■■□□ 2.11
CCDC187A0A096LP49 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.22■■■□□ 2.11
CCDC187A0A096LP49 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC187A0A096LP49 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC187A0A096LP49 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC187A0A096LP49 AL031258.1-201ENST00000623562 325 ntBASIC28.14■■■□□ 2.1
CCDC187A0A096LP49 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
CCDC187A0A096LP49 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.13■■■□□ 2.09
CCDC187A0A096LP49 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CCDC187A0A096LP49 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
CCDC187A0A096LP49 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.1■■■□□ 2.09
CCDC187A0A096LP49 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms