Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.08□□□□□ -0.32
PER3P56645 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.08□□□□□ -0.32
PER3P56645 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.08□□□□□ -0.32
PER3P56645 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.08□□□□□ -0.32
PER3P56645 RPL18AP3-201ENST00000462885 528 ntBASIC13.08□□□□□ -0.32
PER3P56645 ALG1L13P-202ENST00000519320 584 ntBASIC13.08□□□□□ -0.32
PER3P56645 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.08□□□□□ -0.32
PER3P56645 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
PER3P56645 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.08□□□□□ -0.32
PER3P56645 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.08□□□□□ -0.32
PER3P56645 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
PER3P56645 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PER3P56645 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
PER3P56645 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
PER3P56645 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 AC234644.1-201ENST00000406065 370 ntBASIC13.07□□□□□ -0.32
PER3P56645 AL807761.2-201ENST00000422849 729 ntBASIC13.07□□□□□ -0.32
PER3P56645 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.07□□□□□ -0.32
PER3P56645 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.07□□□□□ -0.32
PER3P56645 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.07□□□□□ -0.32
PER3P56645 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 AC007326.1-201ENST00000604539 458 ntBASIC13.07□□□□□ -0.32
PER3P56645 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.07□□□□□ -0.32
PER3P56645 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PER3P56645 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PER3P56645 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.06□□□□□ -0.32
PER3P56645 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.06□□□□□ -0.32
PER3P56645 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PER3P56645 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms