RNA–Protein interactions for RNA: ENST00000556126.2

SMIM6-201, Transcript of small integral membrane protein 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM6, Length 866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM6-201ENST00000556126 NISCHQ9Y2I1 1504 aa34.47■■■■□ 3.11
SMIM6-201ENST00000556126 CCDC180Q9P1Z9 1646 aa30.87■■■□□ 2.53
SMIM6-201ENST00000556126 ABCC9O60706 1549 aa30.62■■■□□ 2.49
SMIM6-201ENST00000556126 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.28
SMIM6-201ENST00000556126 NACADO15069 1562 aa29.13■■■□□ 2.25
SMIM6-201ENST00000556126 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
SMIM6-201ENST00000556126 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
SMIM6-201ENST00000556126 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
SMIM6-201ENST00000556126 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
SMIM6-201ENST00000556126 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
SMIM6-201ENST00000556126 PABPN1Q86U42 306 aaKnown RBP eCLIP28.51■■■□□ 2.15
SMIM6-201ENST00000556126 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
SMIM6-201ENST00000556126 BICRAQ9NZM4 1560 aa28.38■■■□□ 2.13
SMIM6-201ENST00000556126 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
SMIM6-201ENST00000556126 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
SMIM6-201ENST00000556126 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
SMIM6-201ENST00000556126 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
SMIM6-201ENST00000556126 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
SMIM6-201ENST00000556126 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
SMIM6-201ENST00000556126 SMARCA4P51532 1647 aa26.86■■□□□ 1.89
SMIM6-201ENST00000556126 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
SMIM6-201ENST00000556126 SMARCA2P51531 1590 aa26.78■■□□□ 1.88
SMIM6-201ENST00000556126 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
SMIM6-201ENST00000556126 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
SMIM6-201ENST00000556126 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
SMIM6-201ENST00000556126 BAZ1BQ9UIG0 1483 aaKnown RBP26.59■■□□□ 1.85
SMIM6-201ENST00000556126 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
SMIM6-201ENST00000556126 ERCC6Q03468 1493 aa26.45■■□□□ 1.82
SMIM6-201ENST00000556126 NESP48681 1621 aa26.36■■□□□ 1.81
SMIM6-201ENST00000556126 CUX2O14529 1486 aa26.34■■□□□ 1.81
SMIM6-201ENST00000556126 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
SMIM6-201ENST00000556126 WIZO95785 1651 aa26.24■■□□□ 1.79
SMIM6-201ENST00000556126 RSF1Q96T23 1441 aaPredicted RBP26.09■■□□□ 1.77
SMIM6-201ENST00000556126 PDS5BQ9NTI5 1447 aa26.09■■□□□ 1.77
SMIM6-201ENST00000556126 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
SMIM6-201ENST00000556126 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
SMIM6-201ENST00000556126 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
SMIM6-201ENST00000556126 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
SMIM6-201ENST00000556126 AEBP2Q6ZN18 517 aaPredicted RBP25.99■■□□□ 1.75
SMIM6-201ENST00000556126 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
SMIM6-201ENST00000556126 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
SMIM6-201ENST00000556126 CFTRP13569 1480 aa25.82■■□□□ 1.72
SMIM6-201ENST00000556126 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
SMIM6-201ENST00000556126 WDR62O43379 1518 aa25.78■■□□□ 1.72
SMIM6-201ENST00000556126 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
SMIM6-201ENST00000556126 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
SMIM6-201ENST00000556126 PRDM2Q13029 1718 aa25.58■■□□□ 1.69
SMIM6-201ENST00000556126 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
SMIM6-201ENST00000556126 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
SMIM6-201ENST00000556126 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
SMIM6-201ENST00000556126 IFT140Q96RY7 1462 aa25.27■■□□□ 1.64
SMIM6-201ENST00000556126 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
SMIM6-201ENST00000556126 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
SMIM6-201ENST00000556126 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
SMIM6-201ENST00000556126 EIF4G3O43432 1585 aaKnown RBP25.07■■□□□ 1.6
SMIM6-201ENST00000556126 SUPT5HO00267 1087 aaKnown RBP25.07■■□□□ 1.6
SMIM6-201ENST00000556126 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
SMIM6-201ENST00000556126 TARBP1Q13395 1621 aaKnown RBP25.06■■□□□ 1.6
SMIM6-201ENST00000556126 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.59
SMIM6-201ENST00000556126 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
SMIM6-201ENST00000556126 CUX1P39880 1505 aa24.95■■□□□ 1.58
SMIM6-201ENST00000556126 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
SMIM6-201ENST00000556126 SOGA1O94964 1423 aa24.95■■□□□ 1.58
SMIM6-201ENST00000556126 FGD5Q6ZNL6 1462 aa24.94■■□□□ 1.58
SMIM6-201ENST00000556126 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
SMIM6-201ENST00000556126 TDRD9Q8NDG6 1382 aaKnown RBP24.85■■□□□ 1.57
SMIM6-201ENST00000556126 CHD1O14646 1710 aa24.83■■□□□ 1.57
SMIM6-201ENST00000556126 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
SMIM6-201ENST00000556126 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
SMIM6-201ENST00000556126 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
SMIM6-201ENST00000556126 FBLN2P98095 1184 aa24.76■■□□□ 1.55
SMIM6-201ENST00000556126 SNAPC4Q5SXM2 1469 aa24.76■■□□□ 1.55
SMIM6-201ENST00000556126 ARHGEF11O15085 1522 aa24.75■■□□□ 1.55
SMIM6-201ENST00000556126 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
SMIM6-201ENST00000556126 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
SMIM6-201ENST00000556126 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
SMIM6-201ENST00000556126 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
SMIM6-201ENST00000556126 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
SMIM6-201ENST00000556126 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
SMIM6-201ENST00000556126 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
SMIM6-201ENST00000556126 ABCA5Q8WWZ7 1642 aa24.62■■□□□ 1.53
SMIM6-201ENST00000556126 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
SMIM6-201ENST00000556126 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
SMIM6-201ENST00000556126 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
SMIM6-201ENST00000556126 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
SMIM6-201ENST00000556126 CLASP1Q7Z460 1538 aa24.56■■□□□ 1.52
SMIM6-201ENST00000556126 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
SMIM6-201ENST00000556126 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
SMIM6-201ENST00000556126 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
SMIM6-201ENST00000556126 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
SMIM6-201ENST00000556126 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
SMIM6-201ENST00000556126 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
SMIM6-201ENST00000556126 NUP160Q12769 1436 aa24.32■■□□□ 1.48
SMIM6-201ENST00000556126 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
SMIM6-201ENST00000556126 TRHP20396 242 aaPredicted RBP24.18■■□□□ 1.46
SMIM6-201ENST00000556126 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
SMIM6-201ENST00000556126 ERCC6L2Q5T890 1561 aa24.17■■□□□ 1.46
SMIM6-201ENST00000556126 KIF27Q86VH2 1401 aa24.15■■□□□ 1.46
SMIM6-201ENST00000556126 IGF1RP08069 1367 aa24.08■■□□□ 1.45
SMIM6-201ENST00000556126 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms