RNA–Protein interactions for RNA: ENST00000533214.1

SNX19-211, Transcript of sorting nexin 19, humanhuman

TSL 1 (best) BASIC

Gene SNX19, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-211ENST00000533214 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
SNX19-211ENST00000533214 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
SNX19-211ENST00000533214 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
SNX19-211ENST00000533214 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
SNX19-211ENST00000533214 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
SNX19-211ENST00000533214 CCDC180Q9P1Z9 1646 aa24.32■■□□□ 1.48
SNX19-211ENST00000533214 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
SNX19-211ENST00000533214 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
SNX19-211ENST00000533214 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
SNX19-211ENST00000533214 HRCP23327 699 aa23.37■■□□□ 1.33
SNX19-211ENST00000533214 ABCC9O60706 1549 aa23.37■■□□□ 1.33
SNX19-211ENST00000533214 DCAF1Q9Y4B6 1507 aa23.36■■□□□ 1.33
SNX19-211ENST00000533214 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
SNX19-211ENST00000533214 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
SNX19-211ENST00000533214 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
SNX19-211ENST00000533214 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
SNX19-211ENST00000533214 FAM9AQ8IZU1 332 aaPredicted RBP23.01■■□□□ 1.27
SNX19-211ENST00000533214 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
SNX19-211ENST00000533214 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
SNX19-211ENST00000533214 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
SNX19-211ENST00000533214 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
SNX19-211ENST00000533214 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
SNX19-211ENST00000533214 NACADO15069 1562 aa22.64■■□□□ 1.21
SNX19-211ENST00000533214 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
SNX19-211ENST00000533214 WIZO95785 1651 aa22.54■■□□□ 1.2
SNX19-211ENST00000533214 TRIM26Q12899 539 aaPredicted RBP22.54■■□□□ 1.2
SNX19-211ENST00000533214 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
SNX19-211ENST00000533214 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
SNX19-211ENST00000533214 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
SNX19-211ENST00000533214 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.13
SNX19-211ENST00000533214 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
SNX19-211ENST00000533214 SMARCA4P51532 1647 aa22.04■■□□□ 1.12
SNX19-211ENST00000533214 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
SNX19-211ENST00000533214 SCAF1Q9H7N4 1312 aaKnown RBP21.96■■□□□ 1.11
SNX19-211ENST00000533214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
SNX19-211ENST00000533214 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
SNX19-211ENST00000533214 SOGA1O94964 1423 aa21.92■■□□□ 1.1
SNX19-211ENST00000533214 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
SNX19-211ENST00000533214 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
SNX19-211ENST00000533214 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
SNX19-211ENST00000533214 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
SNX19-211ENST00000533214 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
SNX19-211ENST00000533214 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
SNX19-211ENST00000533214 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
SNX19-211ENST00000533214 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
SNX19-211ENST00000533214 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
SNX19-211ENST00000533214 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
SNX19-211ENST00000533214 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
SNX19-211ENST00000533214 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
SNX19-211ENST00000533214 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
SNX19-211ENST00000533214 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
SNX19-211ENST00000533214 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
SNX19-211ENST00000533214 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
SNX19-211ENST00000533214 PELP1Q8IZL8 1130 aaKnown RBP21.46■■□□□ 1.03
SNX19-211ENST00000533214 TNIKQ9UKE5 1360 aa21.45■■□□□ 1.02
SNX19-211ENST00000533214 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
SNX19-211ENST00000533214 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
SNX19-211ENST00000533214 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
SNX19-211ENST00000533214 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
SNX19-211ENST00000533214 GOLGA3Q08378 1498 aa21.36■■□□□ 1.01
SNX19-211ENST00000533214 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
SNX19-211ENST00000533214 EEA1Q15075 1411 aa21.29■■□□□ 1
SNX19-211ENST00000533214 CLIP1P30622 1438 aa21.26■□□□□ 0.99
SNX19-211ENST00000533214 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
SNX19-211ENST00000533214 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
SNX19-211ENST00000533214 APLP2Q06481 763 aa21.2■□□□□ 0.99
SNX19-211ENST00000533214 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
SNX19-211ENST00000533214 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
SNX19-211ENST00000533214 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
SNX19-211ENST00000533214 CUX1P39880 1505 aa21.05■□□□□ 0.96
SNX19-211ENST00000533214 MIER1Q8N108 512 aa21.05■□□□□ 0.96
SNX19-211ENST00000533214 KIF21BO75037 1637 aa21.05■□□□□ 0.96
SNX19-211ENST00000533214 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
SNX19-211ENST00000533214 ITGAEP38570 1179 aa21.03■□□□□ 0.96
SNX19-211ENST00000533214 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
SNX19-211ENST00000533214 P3H3Q8IVL6 736 aa20.97■□□□□ 0.95
SNX19-211ENST00000533214 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
SNX19-211ENST00000533214 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
SNX19-211ENST00000533214 CFTRP13569 1480 aa20.91■□□□□ 0.94
SNX19-211ENST00000533214 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
SNX19-211ENST00000533214 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.93
SNX19-211ENST00000533214 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
SNX19-211ENST00000533214 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
SNX19-211ENST00000533214 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
SNX19-211ENST00000533214 CUX2O14529 1486 aa20.87■□□□□ 0.93
SNX19-211ENST00000533214 CADPSQ9ULU8 1353 aa20.81■□□□□ 0.92
SNX19-211ENST00000533214 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
SNX19-211ENST00000533214 NESP48681 1621 aa20.78■□□□□ 0.92
SNX19-211ENST00000533214 IGF1RP08069 1367 aa20.77■□□□□ 0.91
SNX19-211ENST00000533214 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
SNX19-211ENST00000533214 ARHGAP35Q9NRY4 1499 aa20.72■□□□□ 0.91
SNX19-211ENST00000533214 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
SNX19-211ENST00000533214 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
SNX19-211ENST00000533214 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
SNX19-211ENST00000533214 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
SNX19-211ENST00000533214 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
SNX19-211ENST00000533214 DHX57Q6P158 1386 aaKnown RBP20.58■□□□□ 0.89
SNX19-211ENST00000533214 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
SNX19-211ENST00000533214 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
SNX19-211ENST00000533214 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms