RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
TMCC3-201ENST00000261226 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
TMCC3-201ENST00000261226 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
TMCC3-201ENST00000261226 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
TMCC3-201ENST00000261226 EHMT2Q96KQ7 1210 aa22.63■■□□□ 1.21
TMCC3-201ENST00000261226 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
TMCC3-201ENST00000261226 PELP1Q8IZL8 1130 aaKnown RBP22.3■■□□□ 1.16
TMCC3-201ENST00000261226 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
TMCC3-201ENST00000261226 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
TMCC3-201ENST00000261226 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
TMCC3-201ENST00000261226 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
TMCC3-201ENST00000261226 APLP2Q06481 763 aa21.88■■□□□ 1.09
TMCC3-201ENST00000261226 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
TMCC3-201ENST00000261226 HRCP23327 699 aa21.64■■□□□ 1.05
TMCC3-201ENST00000261226 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
TMCC3-201ENST00000261226 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
TMCC3-201ENST00000261226 MYT1Q01538 1121 aa21.49■■□□□ 1.03
TMCC3-201ENST00000261226 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
TMCC3-201ENST00000261226 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
TMCC3-201ENST00000261226 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
TMCC3-201ENST00000261226 PPARGC1BQ86YN6 1023 aaKnown RBP21.37■■□□□ 1.01
TMCC3-201ENST00000261226 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
TMCC3-201ENST00000261226 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
TMCC3-201ENST00000261226 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
TMCC3-201ENST00000261226 NEFLP07196 543 aa21.15■□□□□ 0.98
TMCC3-201ENST00000261226 ATP1B4Q9UN42 357 aaPredicted RBP21.01■□□□□ 0.95
TMCC3-201ENST00000261226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
TMCC3-201ENST00000261226 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
TMCC3-201ENST00000261226 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
TMCC3-201ENST00000261226 ITGAEP38570 1179 aa20.67■□□□□ 0.9
TMCC3-201ENST00000261226 GTF3C3Q9Y5Q9 886 aa20.62■□□□□ 0.89
TMCC3-201ENST00000261226 POLR3GLQ9BT43 218 aa20.4■□□□□ 0.86
TMCC3-201ENST00000261226 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
TMCC3-201ENST00000261226 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
TMCC3-201ENST00000261226 CNGB1Q14028 1251 aaPredicted RBP20.35■□□□□ 0.85
TMCC3-201ENST00000261226 BCANQ96GW7 911 aa20.32■□□□□ 0.84
TMCC3-201ENST00000261226 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
TMCC3-201ENST00000261226 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
TMCC3-201ENST00000261226 NEUROD1Q13562 356 aa20.1■□□□□ 0.81
TMCC3-201ENST00000261226 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
TMCC3-201ENST00000261226 CDK11AQ9UQ88 783 aaPredicted RBP20■□□□□ 0.79
TMCC3-201ENST00000261226 ANP32CO43423 234 aa19.99■□□□□ 0.79
TMCC3-201ENST00000261226 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
TMCC3-201ENST00000261226 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
TMCC3-201ENST00000261226 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
TMCC3-201ENST00000261226 TRIM52Q96A61 297 aa19.87■□□□□ 0.77
TMCC3-201ENST00000261226 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
TMCC3-201ENST00000261226 FKBP8Q14318 412 aa19.76■□□□□ 0.75
TMCC3-201ENST00000261226 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
TMCC3-201ENST00000261226 SLC4A1APQ9BWU0 796 aaKnown RBP19.72■□□□□ 0.75
TMCC3-201ENST00000261226 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
TMCC3-201ENST00000261226 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
TMCC3-201ENST00000261226 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
TMCC3-201ENST00000261226 ANP32AP39687 249 aaKnown RBP19.63■□□□□ 0.73
TMCC3-201ENST00000261226 MIER1Q8N108 512 aa19.61■□□□□ 0.73
TMCC3-201ENST00000261226 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
TMCC3-201ENST00000261226 ABCC9O60706 1549 aa19.57■□□□□ 0.72
TMCC3-201ENST00000261226 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
TMCC3-201ENST00000261226 P3H3Q8IVL6 736 aa19.52■□□□□ 0.72
TMCC3-201ENST00000261226 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.72
TMCC3-201ENST00000261226 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
TMCC3-201ENST00000261226 EIF5BO60841 1220 aaKnown RBP19.41■□□□□ 0.7
TMCC3-201ENST00000261226 FAM9BQ8IZU0 186 aa19.4■□□□□ 0.7
TMCC3-201ENST00000261226 TONSLQ96HA7 1378 aa19.39■□□□□ 0.7
TMCC3-201ENST00000261226 CANXP27824 592 aaKnown RBP19.39■□□□□ 0.69
TMCC3-201ENST00000261226 NBR1Q14596 966 aa19.39■□□□□ 0.69
TMCC3-201ENST00000261226 ARID3CA6NKF2 412 aa19.35■□□□□ 0.69
TMCC3-201ENST00000261226 IRX6P78412 446 aaPredicted RBP19.33■□□□□ 0.68
TMCC3-201ENST00000261226 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
TMCC3-201ENST00000261226 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
TMCC3-201ENST00000261226 CCDC136Q96JN2 1154 aa19.28■□□□□ 0.68
TMCC3-201ENST00000261226 HIRIP3Q9BW71 556 aaPredicted RBP19.28■□□□□ 0.68
TMCC3-201ENST00000261226 ZBTB47Q9UFB7 747 aaPredicted RBP19.27■□□□□ 0.68
TMCC3-201ENST00000261226 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
TMCC3-201ENST00000261226 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
TMCC3-201ENST00000261226 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
TMCC3-201ENST00000261226 MRS2Q9HD23 443 aa19.18■□□□□ 0.66
TMCC3-201ENST00000261226 ZNF777Q9ULD5 760 aaPredicted RBP19.18■□□□□ 0.66
TMCC3-201ENST00000261226 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
TMCC3-201ENST00000261226 FBLN2P98095 1184 aa19.13■□□□□ 0.65
TMCC3-201ENST00000261226 CLIP1P30622 1438 aa19.12■□□□□ 0.65
TMCC3-201ENST00000261226 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
TMCC3-201ENST00000261226 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
TMCC3-201ENST00000261226 SUPT16HQ9Y5B9 1047 aaKnown RBP19.08■□□□□ 0.65
TMCC3-201ENST00000261226 UPF2Q9HAU5 1272 aaKnown RBP19.05■□□□□ 0.64
TMCC3-201ENST00000261226 ARXQ96QS3 562 aa19.04■□□□□ 0.64
TMCC3-201ENST00000261226 HSP90AA1P07900 732 aaKnown RBP19.03■□□□□ 0.64
TMCC3-201ENST00000261226 ANP32BQ92688 251 aaKnown RBP19.03■□□□□ 0.64
TMCC3-201ENST00000261226 NEFMP07197 916 aa19.02■□□□□ 0.64
TMCC3-201ENST00000261226 GLIPR1L2Q4G1C9 344 aa18.99■□□□□ 0.63
TMCC3-201ENST00000261226 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
TMCC3-201ENST00000261226 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
TMCC3-201ENST00000261226 SLC24A1O60721 1099 aa18.96■□□□□ 0.63
TMCC3-201ENST00000261226 GOLGA3Q08378 1498 aa18.94■□□□□ 0.62
TMCC3-201ENST00000261226 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.93■□□□□ 0.62
TMCC3-201ENST00000261226 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
TMCC3-201ENST00000261226 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
TMCC3-201ENST00000261226 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
TMCC3-201ENST00000261226 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.61
TMCC3-201ENST00000261226 EEA1Q15075 1411 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms