RNA–Protein interactions for RNA: ENST00000316836.4

PNMA1-201, Transcript of PNMA family member 1, humanhuman

APPRIS P1 BASIC

Gene PNMA1, Length 2,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1-201ENST00000316836 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
PNMA1-201ENST00000316836 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
PNMA1-201ENST00000316836 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
PNMA1-201ENST00000316836 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
PNMA1-201ENST00000316836 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
PNMA1-201ENST00000316836 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
PNMA1-201ENST00000316836 ABCC9O60706 1549 aa27.14■■□□□ 1.93
PNMA1-201ENST00000316836 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
PNMA1-201ENST00000316836 NACADO15069 1562 aa26.68■■□□□ 1.86
PNMA1-201ENST00000316836 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.85
PNMA1-201ENST00000316836 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
PNMA1-201ENST00000316836 RB1CC1Q8TDY2 1594 aa26.42■■□□□ 1.82
PNMA1-201ENST00000316836 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
PNMA1-201ENST00000316836 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
PNMA1-201ENST00000316836 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
PNMA1-201ENST00000316836 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
PNMA1-201ENST00000316836 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
PNMA1-201ENST00000316836 BICRAQ9NZM4 1560 aa25.67■■□□□ 1.7
PNMA1-201ENST00000316836 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
PNMA1-201ENST00000316836 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
PNMA1-201ENST00000316836 WIZO95785 1651 aa25.52■■□□□ 1.68
PNMA1-201ENST00000316836 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
PNMA1-201ENST00000316836 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
PNMA1-201ENST00000316836 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
PNMA1-201ENST00000316836 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
PNMA1-201ENST00000316836 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
PNMA1-201ENST00000316836 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
PNMA1-201ENST00000316836 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
PNMA1-201ENST00000316836 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
PNMA1-201ENST00000316836 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
PNMA1-201ENST00000316836 LOC105371045A0A1W2PR82 267 aa24.69■■□□□ 1.54
PNMA1-201ENST00000316836 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
PNMA1-201ENST00000316836 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
PNMA1-201ENST00000316836 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
PNMA1-201ENST00000316836 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
PNMA1-201ENST00000316836 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
PNMA1-201ENST00000316836 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
PNMA1-201ENST00000316836 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
PNMA1-201ENST00000316836 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
PNMA1-201ENST00000316836 SOGA1O94964 1423 aa24.24■■□□□ 1.47
PNMA1-201ENST00000316836 CFTRP13569 1480 aa24.23■■□□□ 1.47
PNMA1-201ENST00000316836 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
PNMA1-201ENST00000316836 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
PNMA1-201ENST00000316836 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
PNMA1-201ENST00000316836 EEA1Q15075 1411 aa24.07■■□□□ 1.44
PNMA1-201ENST00000316836 CSRNP3Q8WYN3 585 aa24.06■■□□□ 1.44
PNMA1-201ENST00000316836 CUX1P39880 1505 aa24■■□□□ 1.43
PNMA1-201ENST00000316836 BIVM-ERCC5R4GMW8 1640 aa24■■□□□ 1.43
PNMA1-201ENST00000316836 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
PNMA1-201ENST00000316836 PRDM2Q13029 1718 aa23.99■■□□□ 1.43
PNMA1-201ENST00000316836 NESP48681 1621 aa23.92■■□□□ 1.42
PNMA1-201ENST00000316836 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
PNMA1-201ENST00000316836 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
PNMA1-201ENST00000316836 PCGF6Q9BYE7 350 aa23.84■■□□□ 1.41
PNMA1-201ENST00000316836 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
PNMA1-201ENST00000316836 TNIKQ9UKE5 1360 aa23.81■■□□□ 1.4
PNMA1-201ENST00000316836 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
PNMA1-201ENST00000316836 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
PNMA1-201ENST00000316836 CEP162Q5TB80 1403 aa23.75■■□□□ 1.39
PNMA1-201ENST00000316836 KIF21BO75037 1637 aa23.74■■□□□ 1.39
PNMA1-201ENST00000316836 KIF27Q86VH2 1401 aa23.71■■□□□ 1.39
PNMA1-201ENST00000316836 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
PNMA1-201ENST00000316836 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.39
PNMA1-201ENST00000316836 TRIM26Q12899 539 aaPredicted RBP23.65■■□□□ 1.38
PNMA1-201ENST00000316836 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
PNMA1-201ENST00000316836 CUX2O14529 1486 aa23.63■■□□□ 1.37
PNMA1-201ENST00000316836 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
PNMA1-201ENST00000316836 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
PNMA1-201ENST00000316836 PRXQ9BXM0 1461 aa23.6■■□□□ 1.37
PNMA1-201ENST00000316836 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
PNMA1-201ENST00000316836 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
PNMA1-201ENST00000316836 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
PNMA1-201ENST00000316836 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
PNMA1-201ENST00000316836 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
PNMA1-201ENST00000316836 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
PNMA1-201ENST00000316836 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
PNMA1-201ENST00000316836 IGF1RP08069 1367 aa23.51■■□□□ 1.35
PNMA1-201ENST00000316836 CLIP1P30622 1438 aa23.5■■□□□ 1.35
PNMA1-201ENST00000316836 HRCP23327 699 aa23.45■■□□□ 1.34
PNMA1-201ENST00000316836 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
PNMA1-201ENST00000316836 CARMIL1Q5VZK9 1371 aa23.41■■□□□ 1.34
PNMA1-201ENST00000316836 TTBK1Q5TCY1 1321 aaPredicted RBP23.38■■□□□ 1.33
PNMA1-201ENST00000316836 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
PNMA1-201ENST00000316836 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
PNMA1-201ENST00000316836 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
PNMA1-201ENST00000316836 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
PNMA1-201ENST00000316836 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
PNMA1-201ENST00000316836 ARAP1Q96P48 1450 aa23.22■■□□□ 1.31
PNMA1-201ENST00000316836 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
PNMA1-201ENST00000316836 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
PNMA1-201ENST00000316836 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
PNMA1-201ENST00000316836 CUL7Q14999 1698 aa23.18■■□□□ 1.3
PNMA1-201ENST00000316836 ARHGAP35Q9NRY4 1499 aa23.16■■□□□ 1.3
PNMA1-201ENST00000316836 APLP2Q06481 763 aa23.16■■□□□ 1.3
PNMA1-201ENST00000316836 WDR62O43379 1518 aa23.13■■□□□ 1.29
PNMA1-201ENST00000316836 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
PNMA1-201ENST00000316836 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
PNMA1-201ENST00000316836 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
PNMA1-201ENST00000316836 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
PNMA1-201ENST00000316836 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms