RNA–Protein interactions for RNA: ENST00000563799.5

NDRG4-221, Transcript of NDRG family member 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene NDRG4, Length 3,014 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG4-221ENST00000563799 NISCHQ9Y2I1 1504 aa28.65■■■□□ 2.18
NDRG4-221ENST00000563799 CCDC180Q9P1Z9 1646 aa24.38■■□□□ 1.49
NDRG4-221ENST00000563799 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
NDRG4-221ENST00000563799 ZCCHC6Q5VYS8 1495 aaKnown RBP24.3■■□□□ 1.48
NDRG4-221ENST00000563799 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
NDRG4-221ENST00000563799 DCAF1Q9Y4B6 1507 aa23.62■■□□□ 1.37
NDRG4-221ENST00000563799 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
NDRG4-221ENST00000563799 MYO15BQ96JP2 1530 aa23.55■■□□□ 1.36
NDRG4-221ENST00000563799 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
NDRG4-221ENST00000563799 HRCP23327 699 aa23.27■■□□□ 1.32
NDRG4-221ENST00000563799 ABCC9O60706 1549 aa23.01■■□□□ 1.27
NDRG4-221ENST00000563799 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
NDRG4-221ENST00000563799 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
NDRG4-221ENST00000563799 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
NDRG4-221ENST00000563799 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
NDRG4-221ENST00000563799 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
NDRG4-221ENST00000563799 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
NDRG4-221ENST00000563799 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.21
NDRG4-221ENST00000563799 NACADO15069 1562 aa22.42■■□□□ 1.18
NDRG4-221ENST00000563799 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
NDRG4-221ENST00000563799 ZEB1P37275 1124 aaPredicted RBP22.3■■□□□ 1.16
NDRG4-221ENST00000563799 CECR2Q9BXF3 1484 aa22.23■■□□□ 1.15
NDRG4-221ENST00000563799 MROH2BQ7Z745 1585 aa22.23■■□□□ 1.15
NDRG4-221ENST00000563799 WIZO95785 1651 aa22.14■■□□□ 1.14
NDRG4-221ENST00000563799 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
NDRG4-221ENST00000563799 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
NDRG4-221ENST00000563799 EIF4G1Q04637 1599 aaKnown RBP22.06■■□□□ 1.12
NDRG4-221ENST00000563799 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
NDRG4-221ENST00000563799 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
NDRG4-221ENST00000563799 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
NDRG4-221ENST00000563799 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
NDRG4-221ENST00000563799 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
NDRG4-221ENST00000563799 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
NDRG4-221ENST00000563799 UNC13AQ9UPW8 1703 aa21.7■■□□□ 1.06
NDRG4-221ENST00000563799 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
NDRG4-221ENST00000563799 EEA1Q15075 1411 aa21.59■■□□□ 1.05
NDRG4-221ENST00000563799 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
NDRG4-221ENST00000563799 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
NDRG4-221ENST00000563799 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
NDRG4-221ENST00000563799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
NDRG4-221ENST00000563799 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
NDRG4-221ENST00000563799 SCAF1Q9H7N4 1312 aaKnown RBP21.53■■□□□ 1.04
NDRG4-221ENST00000563799 SOGA1O94964 1423 aa21.5■■□□□ 1.03
NDRG4-221ENST00000563799 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
NDRG4-221ENST00000563799 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
NDRG4-221ENST00000563799 GOLGA3Q08378 1498 aa21.4■■□□□ 1.02
NDRG4-221ENST00000563799 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
NDRG4-221ENST00000563799 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
NDRG4-221ENST00000563799 KIF21BO75037 1637 aa21.3■■□□□ 1
NDRG4-221ENST00000563799 ACIN1Q9UKV3 1341 aaKnown RBP21.3■■□□□ 1
NDRG4-221ENST00000563799 DIEXFQ68CQ4 756 aaKnown RBP21.29■■□□□ 1
NDRG4-221ENST00000563799 UBTFP17480 764 aaKnown RBP21.28■■□□□ 1
NDRG4-221ENST00000563799 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
NDRG4-221ENST00000563799 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
NDRG4-221ENST00000563799 TTBK1Q5TCY1 1321 aaPredicted RBP21.22■□□□□ 0.99
NDRG4-221ENST00000563799 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
NDRG4-221ENST00000563799 CENPBP07199 599 aaPredicted RBP21.17■□□□□ 0.98
NDRG4-221ENST00000563799 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
NDRG4-221ENST00000563799 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
NDRG4-221ENST00000563799 CLIP1P30622 1438 aa21.12■□□□□ 0.97
NDRG4-221ENST00000563799 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
NDRG4-221ENST00000563799 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
NDRG4-221ENST00000563799 VPS8Q8N3P4 1428 aa21.1■□□□□ 0.97
NDRG4-221ENST00000563799 TOP2BQ02880 1626 aa21.02■□□□□ 0.95
NDRG4-221ENST00000563799 RAPGEF2Q9Y4G8 1499 aa21■□□□□ 0.95
NDRG4-221ENST00000563799 GTF3C3Q9Y5Q9 886 aa21■□□□□ 0.95
NDRG4-221ENST00000563799 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
NDRG4-221ENST00000563799 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
NDRG4-221ENST00000563799 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
NDRG4-221ENST00000563799 APLP2Q06481 763 aa20.9■□□□□ 0.94
NDRG4-221ENST00000563799 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
NDRG4-221ENST00000563799 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
NDRG4-221ENST00000563799 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
NDRG4-221ENST00000563799 HMGXB3Q12766 1538 aa20.77■□□□□ 0.92
NDRG4-221ENST00000563799 MIER1Q8N108 512 aa20.77■□□□□ 0.91
NDRG4-221ENST00000563799 CUX1P39880 1505 aa20.7■□□□□ 0.9
NDRG4-221ENST00000563799 NCAPD3P42695 1498 aa20.7■□□□□ 0.9
NDRG4-221ENST00000563799 DHX57Q6P158 1386 aaKnown RBP20.69■□□□□ 0.9
NDRG4-221ENST00000563799 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
NDRG4-221ENST00000563799 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
NDRG4-221ENST00000563799 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
NDRG4-221ENST00000563799 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
NDRG4-221ENST00000563799 CUX2O14529 1486 aa20.64■□□□□ 0.89
NDRG4-221ENST00000563799 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
NDRG4-221ENST00000563799 CFTRP13569 1480 aa20.59■□□□□ 0.89
NDRG4-221ENST00000563799 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.89
NDRG4-221ENST00000563799 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
NDRG4-221ENST00000563799 MYT1Q01538 1121 aa20.54■□□□□ 0.88
NDRG4-221ENST00000563799 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
NDRG4-221ENST00000563799 MAP3K1Q13233 1512 aa20.49■□□□□ 0.87
NDRG4-221ENST00000563799 TIAM1Q13009 1591 aa20.42■□□□□ 0.86
NDRG4-221ENST00000563799 IGF1RP08069 1367 aa20.38■□□□□ 0.85
NDRG4-221ENST00000563799 MAPKBP1O60336 1514 aa20.34■□□□□ 0.85
NDRG4-221ENST00000563799 RAB3GAP2Q9H2M9 1393 aa20.32■□□□□ 0.84
NDRG4-221ENST00000563799 CFAP43Q8NDM7 1665 aa20.32■□□□□ 0.84
NDRG4-221ENST00000563799 LRRC9Q6ZRR7 1453 aa20.31■□□□□ 0.84
NDRG4-221ENST00000563799 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
NDRG4-221ENST00000563799 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
NDRG4-221ENST00000563799 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.84
NDRG4-221ENST00000563799 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms