RNA–Protein interactions for RNA: ENST00000346246.9

ARID3B-201, Transcript of AT-rich interaction domain 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID3B, Length 4,271 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-201ENST00000346246 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
ARID3B-201ENST00000346246 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
ARID3B-201ENST00000346246 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
ARID3B-201ENST00000346246 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
ARID3B-201ENST00000346246 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
ARID3B-201ENST00000346246 FAM9AQ8IZU1 332 aaPredicted RBP23.49■■□□□ 1.35
ARID3B-201ENST00000346246 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
ARID3B-201ENST00000346246 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
ARID3B-201ENST00000346246 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
ARID3B-201ENST00000346246 LOC105371045A0A1W2PR82 267 aa23.09■■□□□ 1.29
ARID3B-201ENST00000346246 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
ARID3B-201ENST00000346246 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
ARID3B-201ENST00000346246 ABCC9O60706 1549 aa22.76■■□□□ 1.23
ARID3B-201ENST00000346246 HRCP23327 699 aa22.72■■□□□ 1.23
ARID3B-201ENST00000346246 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
ARID3B-201ENST00000346246 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
ARID3B-201ENST00000346246 TRIM26Q12899 539 aaPredicted RBP22.62■■□□□ 1.21
ARID3B-201ENST00000346246 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.21
ARID3B-201ENST00000346246 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
ARID3B-201ENST00000346246 APLP2Q06481 763 aa22.53■■□□□ 1.2
ARID3B-201ENST00000346246 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.18
ARID3B-201ENST00000346246 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
ARID3B-201ENST00000346246 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
ARID3B-201ENST00000346246 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
ARID3B-201ENST00000346246 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
ARID3B-201ENST00000346246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
ARID3B-201ENST00000346246 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
ARID3B-201ENST00000346246 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
ARID3B-201ENST00000346246 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
ARID3B-201ENST00000346246 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
ARID3B-201ENST00000346246 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
ARID3B-201ENST00000346246 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
ARID3B-201ENST00000346246 YTHDC1Q96MU7 727 aaKnown RBP21.73■■□□□ 1.07
ARID3B-201ENST00000346246 ITGAEP38570 1179 aa21.72■■□□□ 1.07
ARID3B-201ENST00000346246 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
ARID3B-201ENST00000346246 NACADO15069 1562 aa21.63■■□□□ 1.05
ARID3B-201ENST00000346246 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
ARID3B-201ENST00000346246 DIEXFQ68CQ4 756 aaKnown RBP21.53■■□□□ 1.04
ARID3B-201ENST00000346246 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
ARID3B-201ENST00000346246 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
ARID3B-201ENST00000346246 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
ARID3B-201ENST00000346246 FAM50AQ14320 339 aaKnown RBP21.24■□□□□ 0.99
ARID3B-201ENST00000346246 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
ARID3B-201ENST00000346246 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
ARID3B-201ENST00000346246 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
ARID3B-201ENST00000346246 WIZO95785 1651 aa21.18■□□□□ 0.98
ARID3B-201ENST00000346246 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.987e-7■■■■■ 52.5
ARID3B-201ENST00000346246 SOGA1O94964 1423 aa21.15■□□□□ 0.98
ARID3B-201ENST00000346246 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
ARID3B-201ENST00000346246 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
ARID3B-201ENST00000346246 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
ARID3B-201ENST00000346246 CLIP1P30622 1438 aa21.08■□□□□ 0.97
ARID3B-201ENST00000346246 GTF3C3Q9Y5Q9 886 aa21.08■□□□□ 0.96
ARID3B-201ENST00000346246 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
ARID3B-201ENST00000346246 EEA1Q15075 1411 aa21.06■□□□□ 0.96
ARID3B-201ENST00000346246 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
ARID3B-201ENST00000346246 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
ARID3B-201ENST00000346246 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
ARID3B-201ENST00000346246 NEFLP07196 543 aa20.91■□□□□ 0.94
ARID3B-201ENST00000346246 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
ARID3B-201ENST00000346246 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
ARID3B-201ENST00000346246 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
ARID3B-201ENST00000346246 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
ARID3B-201ENST00000346246 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
ARID3B-201ENST00000346246 POLR3GLQ9BT43 218 aa20.82■□□□□ 0.92
ARID3B-201ENST00000346246 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
ARID3B-201ENST00000346246 RUSC2Q8N2Y8 1516 aa20.79■□□□□ 0.92
ARID3B-201ENST00000346246 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
ARID3B-201ENST00000346246 MIER1Q8N108 512 aa20.75■□□□□ 0.91
ARID3B-201ENST00000346246 FBLN2P98095 1184 aa20.73■□□□□ 0.91
ARID3B-201ENST00000346246 KIF27Q86VH2 1401 aa20.72■□□□□ 0.91
ARID3B-201ENST00000346246 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.9
ARID3B-201ENST00000346246 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
ARID3B-201ENST00000346246 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
ARID3B-201ENST00000346246 BCANQ96GW7 911 aa20.6■□□□□ 0.89
ARID3B-201ENST00000346246 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
ARID3B-201ENST00000346246 ANP32CO43423 234 aa20.59■□□□□ 0.89
ARID3B-201ENST00000346246 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
ARID3B-201ENST00000346246 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
ARID3B-201ENST00000346246 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
ARID3B-201ENST00000346246 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
ARID3B-201ENST00000346246 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
ARID3B-201ENST00000346246 CUX2O14529 1486 aa20.51■□□□□ 0.87
ARID3B-201ENST00000346246 MYT1LQ9UL68 1186 aa20.5■□□□□ 0.87
ARID3B-201ENST00000346246 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
ARID3B-201ENST00000346246 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
ARID3B-201ENST00000346246 ZNF777Q9ULD5 760 aaPredicted RBP20.49■□□□□ 0.87
ARID3B-201ENST00000346246 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
ARID3B-201ENST00000346246 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
ARID3B-201ENST00000346246 SIN3AQ96ST3 1273 aa20.42■□□□□ 0.86
ARID3B-201ENST00000346246 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
ARID3B-201ENST00000346246 RRP7BPQ9NSQ0 103 aa20.39■□□□□ 0.85
ARID3B-201ENST00000346246 CDK11AQ9UQ88 783 aaPredicted RBP20.37■□□□□ 0.85
ARID3B-201ENST00000346246 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
ARID3B-201ENST00000346246 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
ARID3B-201ENST00000346246 FKBP8Q14318 412 aa20.26■□□□□ 0.83
ARID3B-201ENST00000346246 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
ARID3B-201ENST00000346246 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
ARID3B-201ENST00000346246 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
ARID3B-201ENST00000346246 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms