RNA–Protein interactions for RNA: ENST00000372153.5

DDX31-202, Transcript of DEAD-box helicase 31, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DDX31, Length 3,285 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX31-202ENST00000372153 NISCHQ9Y2I1 1504 aa28.85■■■□□ 2.21
DDX31-202ENST00000372153 DCAF8L2P0C7V8 631 aa25.75■■□□□ 1.71
DDX31-202ENST00000372153 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
DDX31-202ENST00000372153 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
DDX31-202ENST00000372153 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
DDX31-202ENST00000372153 ABCC9O60706 1549 aa24.22■■□□□ 1.47
DDX31-202ENST00000372153 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.45
DDX31-202ENST00000372153 SCRIBQ14160 1630 aa23.53■■□□□ 1.36
DDX31-202ENST00000372153 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
DDX31-202ENST00000372153 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
DDX31-202ENST00000372153 HRCP23327 699 aa23.14■■□□□ 1.3
DDX31-202ENST00000372153 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
DDX31-202ENST00000372153 DCAF1Q9Y4B6 1507 aa23.1■■□□□ 1.29
DDX31-202ENST00000372153 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
DDX31-202ENST00000372153 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
DDX31-202ENST00000372153 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.27
DDX31-202ENST00000372153 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
DDX31-202ENST00000372153 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
DDX31-202ENST00000372153 NACADO15069 1562 aa22.85■■□□□ 1.25
DDX31-202ENST00000372153 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
DDX31-202ENST00000372153 RB1CC1Q8TDY2 1594 aa22.78■■□□□ 1.24
DDX31-202ENST00000372153 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
DDX31-202ENST00000372153 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
DDX31-202ENST00000372153 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
DDX31-202ENST00000372153 WIZO95785 1651 aa22.44■■□□□ 1.18
DDX31-202ENST00000372153 TTBK1Q5TCY1 1321 aaPredicted RBP22.35■■□□□ 1.17
DDX31-202ENST00000372153 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
DDX31-202ENST00000372153 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
DDX31-202ENST00000372153 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
DDX31-202ENST00000372153 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
DDX31-202ENST00000372153 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
DDX31-202ENST00000372153 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
DDX31-202ENST00000372153 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
DDX31-202ENST00000372153 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
DDX31-202ENST00000372153 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
DDX31-202ENST00000372153 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.09
DDX31-202ENST00000372153 PELP1Q8IZL8 1130 aaKnown RBP21.88■■□□□ 1.09
DDX31-202ENST00000372153 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
DDX31-202ENST00000372153 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
DDX31-202ENST00000372153 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
DDX31-202ENST00000372153 DNAJC5BQ9UF47 199 aa21.75■■□□□ 1.07
DDX31-202ENST00000372153 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
DDX31-202ENST00000372153 SOGA1O94964 1423 aa21.74■■□□□ 1.07
DDX31-202ENST00000372153 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
DDX31-202ENST00000372153 RUSC2Q8N2Y8 1516 aa21.67■■□□□ 1.06
DDX31-202ENST00000372153 CSRNP3Q8WYN3 585 aa21.62■■□□□ 1.05
DDX31-202ENST00000372153 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
DDX31-202ENST00000372153 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
DDX31-202ENST00000372153 ATP1B4Q9UN42 357 aaPredicted RBP21.42■■□□□ 1.02
DDX31-202ENST00000372153 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
DDX31-202ENST00000372153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.01
DDX31-202ENST00000372153 ACIN1Q9UKV3 1341 aaKnown RBP21.35■■□□□ 1.01
DDX31-202ENST00000372153 P3H3Q8IVL6 736 aa21.33■■□□□ 1.01
DDX31-202ENST00000372153 NCAPD3P42695 1498 aa21.3■■□□□ 1
DDX31-202ENST00000372153 CC2D2AQ9P2K1 1620 aa21.3■■□□□ 1
DDX31-202ENST00000372153 CCER1Q8TC90 406 aaPredicted RBP21.3■■□□□ 1
DDX31-202ENST00000372153 GTF3C3Q9Y5Q9 886 aa21.3■■□□□ 1
DDX31-202ENST00000372153 SYNJ1O43426 1573 aa21.3■■□□□ 1
DDX31-202ENST00000372153 APLP2Q06481 763 aa21.27■■□□□ 1
DDX31-202ENST00000372153 NESP48681 1621 aa21.27■■□□□ 1
DDX31-202ENST00000372153 HNRNPUL2Q1KMD3 747 aaKnown RBP21.24■□□□□ 0.99
DDX31-202ENST00000372153 CEP162Q5TB80 1403 aa21.23■□□□□ 0.99
DDX31-202ENST00000372153 PEG3Q9GZU2 1588 aa21.22■□□□□ 0.99
DDX31-202ENST00000372153 ITGAEP38570 1179 aa21.16■□□□□ 0.98
DDX31-202ENST00000372153 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
DDX31-202ENST00000372153 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
DDX31-202ENST00000372153 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
DDX31-202ENST00000372153 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
DDX31-202ENST00000372153 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
DDX31-202ENST00000372153 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
DDX31-202ENST00000372153 CUX2O14529 1486 aa21.04■□□□□ 0.96
DDX31-202ENST00000372153 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
DDX31-202ENST00000372153 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
DDX31-202ENST00000372153 CFTRP13569 1480 aa21.03■□□□□ 0.96
DDX31-202ENST00000372153 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
DDX31-202ENST00000372153 CLIP1P30622 1438 aa21.03■□□□□ 0.96
DDX31-202ENST00000372153 CUX1P39880 1505 aa21.02■□□□□ 0.96
DDX31-202ENST00000372153 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
DDX31-202ENST00000372153 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
DDX31-202ENST00000372153 FANCD2Q9BXW9 1451 aa20.98■□□□□ 0.95
DDX31-202ENST00000372153 FBLN2P98095 1184 aa20.98■□□□□ 0.95
DDX31-202ENST00000372153 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
DDX31-202ENST00000372153 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
DDX31-202ENST00000372153 EEA1Q15075 1411 aa20.93■□□□□ 0.94
DDX31-202ENST00000372153 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.93
DDX31-202ENST00000372153 MYT1Q01538 1121 aa20.88■□□□□ 0.93
DDX31-202ENST00000372153 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
DDX31-202ENST00000372153 TOP2BQ02880 1626 aa20.84■□□□□ 0.93
DDX31-202ENST00000372153 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
DDX31-202ENST00000372153 IGF1RP08069 1367 aa20.79■□□□□ 0.92
DDX31-202ENST00000372153 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
DDX31-202ENST00000372153 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
DDX31-202ENST00000372153 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
DDX31-202ENST00000372153 MIER1Q8N108 512 aa20.67■□□□□ 0.9
DDX31-202ENST00000372153 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
DDX31-202ENST00000372153 ERCC6Q03468 1493 aa20.66■□□□□ 0.9
DDX31-202ENST00000372153 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
DDX31-202ENST00000372153 AQRO60306 1485 aaKnown RBP eCLIP20.64■□□□□ 0.893e-7■■■□□ 17
DDX31-202ENST00000372153 VPS8Q8N3P4 1428 aa20.62■□□□□ 0.89
DDX31-202ENST00000372153 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms