RNA–Protein interactions for RNA: ENST00000317896.11

HFE-202, Transcript of homeostatic iron regulator, humanhuman

TSL 1 (best) BASIC

Gene HFE, Length 1,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFE-202ENST00000317896 NISCHQ9Y2I1 1504 aa29.89■■■□□ 2.37
HFE-202ENST00000317896 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
HFE-202ENST00000317896 ABCC9O60706 1549 aa26.7■■□□□ 1.86
HFE-202ENST00000317896 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
HFE-202ENST00000317896 NACADO15069 1562 aa25.35■■□□□ 1.65
HFE-202ENST00000317896 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
HFE-202ENST00000317896 MYO15BQ96JP2 1530 aa25.04■■□□□ 1.6
HFE-202ENST00000317896 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
HFE-202ENST00000317896 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
HFE-202ENST00000317896 ZCCHC6Q5VYS8 1495 aaKnown RBP24.78■■□□□ 1.56
HFE-202ENST00000317896 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
HFE-202ENST00000317896 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
HFE-202ENST00000317896 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
HFE-202ENST00000317896 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
HFE-202ENST00000317896 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
HFE-202ENST00000317896 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
HFE-202ENST00000317896 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
HFE-202ENST00000317896 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
HFE-202ENST00000317896 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
HFE-202ENST00000317896 NCAPD3P42695 1498 aa23.39■■□□□ 1.33
HFE-202ENST00000317896 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
HFE-202ENST00000317896 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
HFE-202ENST00000317896 SMARCA2P51531 1590 aa23.28■■□□□ 1.32
HFE-202ENST00000317896 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
HFE-202ENST00000317896 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
HFE-202ENST00000317896 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
HFE-202ENST00000317896 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
HFE-202ENST00000317896 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
HFE-202ENST00000317896 HRCP23327 699 aa23.08■■□□□ 1.28
HFE-202ENST00000317896 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
HFE-202ENST00000317896 CUX2O14529 1486 aa23.04■■□□□ 1.28
HFE-202ENST00000317896 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
HFE-202ENST00000317896 NESP48681 1621 aa22.92■■□□□ 1.26
HFE-202ENST00000317896 DNAJC5Q9H3Z4 198 aa22.91■■□□□ 1.26
HFE-202ENST00000317896 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
HFE-202ENST00000317896 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
HFE-202ENST00000317896 WIZO95785 1651 aa22.69■■□□□ 1.22
HFE-202ENST00000317896 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
HFE-202ENST00000317896 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
HFE-202ENST00000317896 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
HFE-202ENST00000317896 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
HFE-202ENST00000317896 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
HFE-202ENST00000317896 MRC2Q9UBG0 1479 aa22.52■■□□□ 1.2
HFE-202ENST00000317896 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
HFE-202ENST00000317896 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
HFE-202ENST00000317896 WDR62O43379 1518 aa22.44■■□□□ 1.18
HFE-202ENST00000317896 CFTRP13569 1480 aa22.43■■□□□ 1.18
HFE-202ENST00000317896 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
HFE-202ENST00000317896 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
HFE-202ENST00000317896 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
HFE-202ENST00000317896 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
HFE-202ENST00000317896 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
HFE-202ENST00000317896 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
HFE-202ENST00000317896 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
HFE-202ENST00000317896 PRDM2Q13029 1718 aa22.14■■□□□ 1.14
HFE-202ENST00000317896 ABCC8Q09428 1581 aa22.02■■□□□ 1.12
HFE-202ENST00000317896 OSCARQ8IYS5 282 aa22.02■■□□□ 1.11
HFE-202ENST00000317896 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
HFE-202ENST00000317896 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
HFE-202ENST00000317896 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
HFE-202ENST00000317896 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
HFE-202ENST00000317896 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
HFE-202ENST00000317896 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
HFE-202ENST00000317896 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
HFE-202ENST00000317896 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.08
HFE-202ENST00000317896 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
HFE-202ENST00000317896 AQRO60306 1485 aaKnown RBP eCLIP21.72■■□□□ 1.07
HFE-202ENST00000317896 SOGA1O94964 1423 aa21.7■■□□□ 1.06
HFE-202ENST00000317896 FAM9AQ8IZU1 332 aaPredicted RBP21.66■■□□□ 1.06
HFE-202ENST00000317896 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
HFE-202ENST00000317896 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.06
HFE-202ENST00000317896 FBLN2P98095 1184 aa21.63■■□□□ 1.05
HFE-202ENST00000317896 WDR97A6NE52 1622 aa21.62■■□□□ 1.05
HFE-202ENST00000317896 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
HFE-202ENST00000317896 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
HFE-202ENST00000317896 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
HFE-202ENST00000317896 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
HFE-202ENST00000317896 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
HFE-202ENST00000317896 CUX1P39880 1505 aa21.6■■□□□ 1.05
HFE-202ENST00000317896 CHD1O14646 1710 aa21.57■■□□□ 1.04
HFE-202ENST00000317896 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
HFE-202ENST00000317896 GRIN2BQ13224 1484 aa21.52■■□□□ 1.03
HFE-202ENST00000317896 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
HFE-202ENST00000317896 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
HFE-202ENST00000317896 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
HFE-202ENST00000317896 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
HFE-202ENST00000317896 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
HFE-202ENST00000317896 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
HFE-202ENST00000317896 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
HFE-202ENST00000317896 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
HFE-202ENST00000317896 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.01
HFE-202ENST00000317896 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
HFE-202ENST00000317896 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
HFE-202ENST00000317896 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
HFE-202ENST00000317896 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
HFE-202ENST00000317896 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
HFE-202ENST00000317896 TOP2BQ02880 1626 aa21.3■■□□□ 1
HFE-202ENST00000317896 CCER1Q8TC90 406 aaPredicted RBP21.3■■□□□ 1
HFE-202ENST00000317896 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
HFE-202ENST00000317896 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms