RNA–Protein interactions for RNA: ENST00000344321.8

RUFY4-201, Transcript of RUN and FYVE domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RUFY4, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4-201ENST00000344321 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
RUFY4-201ENST00000344321 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
RUFY4-201ENST00000344321 ABCC9O60706 1549 aa23.27■■□□□ 1.32
RUFY4-201ENST00000344321 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
RUFY4-201ENST00000344321 HRCP23327 699 aa23.15■■□□□ 1.3
RUFY4-201ENST00000344321 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
RUFY4-201ENST00000344321 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
RUFY4-201ENST00000344321 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
RUFY4-201ENST00000344321 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
RUFY4-201ENST00000344321 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
RUFY4-201ENST00000344321 NACADO15069 1562 aa22.77■■□□□ 1.24
RUFY4-201ENST00000344321 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
RUFY4-201ENST00000344321 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
RUFY4-201ENST00000344321 RB1CC1Q8TDY2 1594 aa22.68■■□□□ 1.22
RUFY4-201ENST00000344321 PPARGC1BQ86YN6 1023 aaKnown RBP22.63■■□□□ 1.21
RUFY4-201ENST00000344321 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
RUFY4-201ENST00000344321 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
RUFY4-201ENST00000344321 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
RUFY4-201ENST00000344321 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
RUFY4-201ENST00000344321 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
RUFY4-201ENST00000344321 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
RUFY4-201ENST00000344321 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
RUFY4-201ENST00000344321 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
RUFY4-201ENST00000344321 PABPN1Q86U42 306 aaKnown RBP eCLIP21.76■■□□□ 1.07
RUFY4-201ENST00000344321 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
RUFY4-201ENST00000344321 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1.01
RUFY4-201ENST00000344321 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
RUFY4-201ENST00000344321 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
RUFY4-201ENST00000344321 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
RUFY4-201ENST00000344321 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
RUFY4-201ENST00000344321 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
RUFY4-201ENST00000344321 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
RUFY4-201ENST00000344321 NEUROD1Q13562 356 aa21.25■□□□□ 0.99
RUFY4-201ENST00000344321 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
RUFY4-201ENST00000344321 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
RUFY4-201ENST00000344321 MYT1Q01538 1121 aa21.11■□□□□ 0.97
RUFY4-201ENST00000344321 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
RUFY4-201ENST00000344321 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
RUFY4-201ENST00000344321 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
RUFY4-201ENST00000344321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
RUFY4-201ENST00000344321 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
RUFY4-201ENST00000344321 ATAD2BQ9ULI0 1458 aa21.02■□□□□ 0.96
RUFY4-201ENST00000344321 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
RUFY4-201ENST00000344321 DIEXFQ68CQ4 756 aaKnown RBP21■□□□□ 0.95
RUFY4-201ENST00000344321 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
RUFY4-201ENST00000344321 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
RUFY4-201ENST00000344321 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
RUFY4-201ENST00000344321 WIZO95785 1651 aa20.94■□□□□ 0.94
RUFY4-201ENST00000344321 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
RUFY4-201ENST00000344321 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
RUFY4-201ENST00000344321 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
RUFY4-201ENST00000344321 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
RUFY4-201ENST00000344321 ZNF316A6NFI3 1004 aaPredicted RBP20.67■□□□□ 0.9
RUFY4-201ENST00000344321 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
RUFY4-201ENST00000344321 YTHDC1Q96MU7 727 aaKnown RBP20.57■□□□□ 0.88
RUFY4-201ENST00000344321 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
RUFY4-201ENST00000344321 MIER1Q8N108 512 aa20.51■□□□□ 0.87
RUFY4-201ENST00000344321 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
RUFY4-201ENST00000344321 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
RUFY4-201ENST00000344321 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
RUFY4-201ENST00000344321 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
RUFY4-201ENST00000344321 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
RUFY4-201ENST00000344321 SOGA1O94964 1423 aa20.36■□□□□ 0.85
RUFY4-201ENST00000344321 CFTRP13569 1480 aa20.34■□□□□ 0.85
RUFY4-201ENST00000344321 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
RUFY4-201ENST00000344321 NESP48681 1621 aa20.26■□□□□ 0.83
RUFY4-201ENST00000344321 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
RUFY4-201ENST00000344321 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
RUFY4-201ENST00000344321 EEA1Q15075 1411 aa20.25■□□□□ 0.83
RUFY4-201ENST00000344321 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
RUFY4-201ENST00000344321 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
RUFY4-201ENST00000344321 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
RUFY4-201ENST00000344321 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
RUFY4-201ENST00000344321 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
RUFY4-201ENST00000344321 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.81
RUFY4-201ENST00000344321 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
RUFY4-201ENST00000344321 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.8
RUFY4-201ENST00000344321 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
RUFY4-201ENST00000344321 ERCC6Q03468 1493 aa20.06■□□□□ 0.8
RUFY4-201ENST00000344321 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
RUFY4-201ENST00000344321 CLIP1P30622 1438 aa20■□□□□ 0.79
RUFY4-201ENST00000344321 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
RUFY4-201ENST00000344321 KIF21BO75037 1637 aa19.98■□□□□ 0.79
RUFY4-201ENST00000344321 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
RUFY4-201ENST00000344321 ANP32EQ9BTT0 268 aa19.97■□□□□ 0.79
RUFY4-201ENST00000344321 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
RUFY4-201ENST00000344321 DHX57Q6P158 1386 aaKnown RBP19.94■□□□□ 0.78
RUFY4-201ENST00000344321 WDR62O43379 1518 aa19.91■□□□□ 0.78
RUFY4-201ENST00000344321 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
RUFY4-201ENST00000344321 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
RUFY4-201ENST00000344321 APLP2Q06481 763 aa19.86■□□□□ 0.77
RUFY4-201ENST00000344321 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
RUFY4-201ENST00000344321 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
RUFY4-201ENST00000344321 CUX1P39880 1505 aa19.84■□□□□ 0.77
RUFY4-201ENST00000344321 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
RUFY4-201ENST00000344321 RAPGEF2Q9Y4G8 1499 aa19.81■□□□□ 0.76
RUFY4-201ENST00000344321 TOP2BQ02880 1626 aa19.81■□□□□ 0.76
RUFY4-201ENST00000344321 BCL11AQ9H165 835 aa19.79■□□□□ 0.76
RUFY4-201ENST00000344321 CUX2O14529 1486 aa19.79■□□□□ 0.76
RUFY4-201ENST00000344321 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms