RNA–Protein interactions for RNA: ENST00000432124.5

PTPA-215, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4 BASIC

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-215ENST00000432124 NISCHQ9Y2I1 1504 aa34.65■■■■□ 3.14
PTPA-215ENST00000432124 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
PTPA-215ENST00000432124 ABCC9O60706 1549 aa29.21■■■□□ 2.27
PTPA-215ENST00000432124 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
PTPA-215ENST00000432124 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
PTPA-215ENST00000432124 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
PTPA-215ENST00000432124 NACADO15069 1562 aa28.64■■■□□ 2.18
PTPA-215ENST00000432124 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
PTPA-215ENST00000432124 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
PTPA-215ENST00000432124 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
PTPA-215ENST00000432124 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
PTPA-215ENST00000432124 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
PTPA-215ENST00000432124 BICRAQ9NZM4 1560 aa27.55■■■□□ 2
PTPA-215ENST00000432124 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
PTPA-215ENST00000432124 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
PTPA-215ENST00000432124 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
PTPA-215ENST00000432124 EIF4G1Q04637 1599 aaKnown RBP26.81■■□□□ 1.88
PTPA-215ENST00000432124 SMARCA4P51532 1647 aa26.79■■□□□ 1.88
PTPA-215ENST00000432124 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
PTPA-215ENST00000432124 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
PTPA-215ENST00000432124 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
PTPA-215ENST00000432124 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
PTPA-215ENST00000432124 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
PTPA-215ENST00000432124 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
PTPA-215ENST00000432124 WIZO95785 1651 aa26.41■■□□□ 1.82
PTPA-215ENST00000432124 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
PTPA-215ENST00000432124 HMGXB3Q12766 1538 aa26.37■■□□□ 1.81
PTPA-215ENST00000432124 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
PTPA-215ENST00000432124 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
PTPA-215ENST00000432124 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
PTPA-215ENST00000432124 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
PTPA-215ENST00000432124 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
PTPA-215ENST00000432124 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
PTPA-215ENST00000432124 CFTRP13569 1480 aa25.61■■□□□ 1.69
PTPA-215ENST00000432124 CADPSQ9ULU8 1353 aa25.61■■□□□ 1.69
PTPA-215ENST00000432124 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
PTPA-215ENST00000432124 NESP48681 1621 aa25.44■■□□□ 1.66
PTPA-215ENST00000432124 PDS5BQ9NTI5 1447 aa25.4■■□□□ 1.66
PTPA-215ENST00000432124 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
PTPA-215ENST00000432124 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
PTPA-215ENST00000432124 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
PTPA-215ENST00000432124 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
PTPA-215ENST00000432124 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
PTPA-215ENST00000432124 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
PTPA-215ENST00000432124 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
PTPA-215ENST00000432124 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
PTPA-215ENST00000432124 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
PTPA-215ENST00000432124 WDR62O43379 1518 aa25.02■■□□□ 1.6
PTPA-215ENST00000432124 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
PTPA-215ENST00000432124 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
PTPA-215ENST00000432124 CUX1P39880 1505 aa25■■□□□ 1.59
PTPA-215ENST00000432124 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
PTPA-215ENST00000432124 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
PTPA-215ENST00000432124 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
PTPA-215ENST00000432124 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
PTPA-215ENST00000432124 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
PTPA-215ENST00000432124 TRIM41Q8WV44 630 aa24.83■■□□□ 1.57
PTPA-215ENST00000432124 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
PTPA-215ENST00000432124 CUX2O14529 1486 aa24.8■■□□□ 1.56
PTPA-215ENST00000432124 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
PTPA-215ENST00000432124 SOGA1O94964 1423 aa24.69■■□□□ 1.54
PTPA-215ENST00000432124 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
PTPA-215ENST00000432124 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
PTPA-215ENST00000432124 WDR97A6NE52 1622 aa24.67■■□□□ 1.54
PTPA-215ENST00000432124 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
PTPA-215ENST00000432124 EEA1Q15075 1411 aa24.55■■□□□ 1.52
PTPA-215ENST00000432124 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
PTPA-215ENST00000432124 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
PTPA-215ENST00000432124 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
PTPA-215ENST00000432124 GAPVD1Q14C86 1478 aa24.45■■□□□ 1.51
PTPA-215ENST00000432124 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
PTPA-215ENST00000432124 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
PTPA-215ENST00000432124 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
PTPA-215ENST00000432124 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
PTPA-215ENST00000432124 GRIN2BQ13224 1484 aa24.39■■□□□ 1.5
PTPA-215ENST00000432124 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.493e-7■■■■■ 30.5
PTPA-215ENST00000432124 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
PTPA-215ENST00000432124 CUL7Q14999 1698 aa24.34■■□□□ 1.49
PTPA-215ENST00000432124 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
PTPA-215ENST00000432124 IGF1RP08069 1367 aa24.28■■□□□ 1.48
PTPA-215ENST00000432124 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
PTPA-215ENST00000432124 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
PTPA-215ENST00000432124 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
PTPA-215ENST00000432124 FHAD1B1AJZ9 1412 aa24.22■■□□□ 1.47
PTPA-215ENST00000432124 KIF21BO75037 1637 aa24.21■■□□□ 1.47
PTPA-215ENST00000432124 PRXQ9BXM0 1461 aa24.2■■□□□ 1.47
PTPA-215ENST00000432124 CARMIL1Q5VZK9 1371 aa24.18■■□□□ 1.46
PTPA-215ENST00000432124 FAM9AQ8IZU1 332 aaPredicted RBP24.18■■□□□ 1.46
PTPA-215ENST00000432124 SYNJ2O15056 1496 aa24.16■■□□□ 1.46
PTPA-215ENST00000432124 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
PTPA-215ENST00000432124 GOLGA3Q08378 1498 aa24.09■■□□□ 1.45
PTPA-215ENST00000432124 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
PTPA-215ENST00000432124 CHD1O14646 1710 aa24.02■■□□□ 1.44
PTPA-215ENST00000432124 CHMP7Q8WUX9 453 aaPredicted RBP24.02■■□□□ 1.44
PTPA-215ENST00000432124 NUP160Q12769 1436 aa23.95■■□□□ 1.42
PTPA-215ENST00000432124 CTTNBP2Q8WZ74 1663 aa23.93■■□□□ 1.42
PTPA-215ENST00000432124 FBLN2P98095 1184 aa23.92■■□□□ 1.42
PTPA-215ENST00000432124 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
PTPA-215ENST00000432124 TNIKQ9UKE5 1360 aa23.87■■□□□ 1.41
PTPA-215ENST00000432124 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms