RNA–Protein interactions for RNA: ENST00000314830.12

SH2D3C-201, Transcript of SH2 domain containing 3C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SH2D3C, Length 3,124 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-201ENST00000314830 NISCHQ9Y2I1 1504 aa27.56■■■□□ 2
SH2D3C-201ENST00000314830 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
SH2D3C-201ENST00000314830 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
SH2D3C-201ENST00000314830 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
SH2D3C-201ENST00000314830 HRCP23327 699 aa22.91■■□□□ 1.26
SH2D3C-201ENST00000314830 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
SH2D3C-201ENST00000314830 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
SH2D3C-201ENST00000314830 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
SH2D3C-201ENST00000314830 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
SH2D3C-201ENST00000314830 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
SH2D3C-201ENST00000314830 PCGF6Q9BYE7 350 aa22.34■■□□□ 1.17
SH2D3C-201ENST00000314830 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
SH2D3C-201ENST00000314830 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
SH2D3C-201ENST00000314830 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
SH2D3C-201ENST00000314830 ABCC9O60706 1549 aa22■■□□□ 1.11
SH2D3C-201ENST00000314830 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
SH2D3C-201ENST00000314830 RSF1Q96T23 1441 aaPredicted RBP21.77■■□□□ 1.08
SH2D3C-201ENST00000314830 MYT1Q01538 1121 aa21.74■■□□□ 1.07
SH2D3C-201ENST00000314830 NACADO15069 1562 aa21.73■■□□□ 1.07
SH2D3C-201ENST00000314830 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
SH2D3C-201ENST00000314830 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
SH2D3C-201ENST00000314830 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
SH2D3C-201ENST00000314830 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
SH2D3C-201ENST00000314830 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
SH2D3C-201ENST00000314830 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
SH2D3C-201ENST00000314830 WIZO95785 1651 aa21.33■■□□□ 1
SH2D3C-201ENST00000314830 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
SH2D3C-201ENST00000314830 ACIN1Q9UKV3 1341 aaKnown RBP21.25■□□□□ 0.99
SH2D3C-201ENST00000314830 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
SH2D3C-201ENST00000314830 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
SH2D3C-201ENST00000314830 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
SH2D3C-201ENST00000314830 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
SH2D3C-201ENST00000314830 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
SH2D3C-201ENST00000314830 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
SH2D3C-201ENST00000314830 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.95
SH2D3C-201ENST00000314830 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
SH2D3C-201ENST00000314830 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
SH2D3C-201ENST00000314830 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
SH2D3C-201ENST00000314830 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
SH2D3C-201ENST00000314830 CENPBP07199 599 aaPredicted RBP20.85■□□□□ 0.93
SH2D3C-201ENST00000314830 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
SH2D3C-201ENST00000314830 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
SH2D3C-201ENST00000314830 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
SH2D3C-201ENST00000314830 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
SH2D3C-201ENST00000314830 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
SH2D3C-201ENST00000314830 SOGA1O94964 1423 aa20.58■□□□□ 0.89
SH2D3C-201ENST00000314830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
SH2D3C-201ENST00000314830 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
SH2D3C-201ENST00000314830 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
SH2D3C-201ENST00000314830 YTHDC1Q96MU7 727 aaKnown RBP20.49■□□□□ 0.87
SH2D3C-201ENST00000314830 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
SH2D3C-201ENST00000314830 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
SH2D3C-201ENST00000314830 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
SH2D3C-201ENST00000314830 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
SH2D3C-201ENST00000314830 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
SH2D3C-201ENST00000314830 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
SH2D3C-201ENST00000314830 EEA1Q15075 1411 aa20.44■□□□□ 0.86
SH2D3C-201ENST00000314830 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
SH2D3C-201ENST00000314830 TNIKQ9UKE5 1360 aa20.4■□□□□ 0.86
SH2D3C-201ENST00000314830 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
SH2D3C-201ENST00000314830 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
SH2D3C-201ENST00000314830 GOLGA3Q08378 1498 aa20.32■□□□□ 0.84
SH2D3C-201ENST00000314830 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
SH2D3C-201ENST00000314830 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
SH2D3C-201ENST00000314830 KIF21BO75037 1637 aa20.2■□□□□ 0.82
SH2D3C-201ENST00000314830 MIER1Q8N108 512 aa20.16■□□□□ 0.82
SH2D3C-201ENST00000314830 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.82
SH2D3C-201ENST00000314830 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
SH2D3C-201ENST00000314830 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
SH2D3C-201ENST00000314830 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
SH2D3C-201ENST00000314830 RAPGEF2Q9Y4G8 1499 aa20.09■□□□□ 0.81
SH2D3C-201ENST00000314830 CLIP1P30622 1438 aa20.08■□□□□ 0.81
SH2D3C-201ENST00000314830 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
SH2D3C-201ENST00000314830 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
SH2D3C-201ENST00000314830 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
SH2D3C-201ENST00000314830 PRKCSHP14314 528 aaPredicted RBP19.98■□□□□ 0.79
SH2D3C-201ENST00000314830 VPS8Q8N3P4 1428 aa19.98■□□□□ 0.79
SH2D3C-201ENST00000314830 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
SH2D3C-201ENST00000314830 CUX1P39880 1505 aa19.96■□□□□ 0.79
SH2D3C-201ENST00000314830 CFTRP13569 1480 aa19.92■□□□□ 0.78
SH2D3C-201ENST00000314830 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
SH2D3C-201ENST00000314830 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
SH2D3C-201ENST00000314830 APLP2Q06481 763 aa19.85■□□□□ 0.77
SH2D3C-201ENST00000314830 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.77
SH2D3C-201ENST00000314830 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
SH2D3C-201ENST00000314830 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
SH2D3C-201ENST00000314830 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
SH2D3C-201ENST00000314830 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
SH2D3C-201ENST00000314830 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
SH2D3C-201ENST00000314830 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
SH2D3C-201ENST00000314830 CUX2O14529 1486 aa19.67■□□□□ 0.74
SH2D3C-201ENST00000314830 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
SH2D3C-201ENST00000314830 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
SH2D3C-201ENST00000314830 BCANQ96GW7 911 aa19.62■□□□□ 0.73
SH2D3C-201ENST00000314830 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
SH2D3C-201ENST00000314830 IGF1RP08069 1367 aa19.6■□□□□ 0.73
SH2D3C-201ENST00000314830 FANCD2Q9BXW9 1451 aa19.53■□□□□ 0.72
SH2D3C-201ENST00000314830 RBM19Q9Y4C8 960 aaKnown RBP19.53■□□□□ 0.72
SH2D3C-201ENST00000314830 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
SH2D3C-201ENST00000314830 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms