RNA–Protein interactions for RNA: ENST00000535047.5

PPFIBP1-204, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PPFIBP1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-204ENST00000535047 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
PPFIBP1-204ENST00000535047 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
PPFIBP1-204ENST00000535047 ABCC9O60706 1549 aa30.36■■■□□ 2.45
PPFIBP1-204ENST00000535047 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
PPFIBP1-204ENST00000535047 NACADO15069 1562 aa29.1■■■□□ 2.25
PPFIBP1-204ENST00000535047 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
PPFIBP1-204ENST00000535047 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
PPFIBP1-204ENST00000535047 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
PPFIBP1-204ENST00000535047 DCAF1Q9Y4B6 1507 aa28.71■■■□□ 2.19
PPFIBP1-204ENST00000535047 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
PPFIBP1-204ENST00000535047 PABPN1Q86U42 306 aaKnown RBP eCLIP28.29■■■□□ 2.12
PPFIBP1-204ENST00000535047 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
PPFIBP1-204ENST00000535047 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
PPFIBP1-204ENST00000535047 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
PPFIBP1-204ENST00000535047 DNAJC5BQ9UF47 199 aa27.83■■■□□ 2.05
PPFIBP1-204ENST00000535047 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
PPFIBP1-204ENST00000535047 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
PPFIBP1-204ENST00000535047 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
PPFIBP1-204ENST00000535047 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
PPFIBP1-204ENST00000535047 SMARCA4P51532 1647 aa27.01■■□□□ 1.92
PPFIBP1-204ENST00000535047 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
PPFIBP1-204ENST00000535047 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PPFIBP1-204ENST00000535047 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
PPFIBP1-204ENST00000535047 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
PPFIBP1-204ENST00000535047 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
PPFIBP1-204ENST00000535047 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
PPFIBP1-204ENST00000535047 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
PPFIBP1-204ENST00000535047 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
PPFIBP1-204ENST00000535047 BAZ1BQ9UIG0 1483 aaKnown RBP26.64■■□□□ 1.86
PPFIBP1-204ENST00000535047 WIZO95785 1651 aa26.51■■□□□ 1.83
PPFIBP1-204ENST00000535047 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.81
PPFIBP1-204ENST00000535047 NESP48681 1621 aa26.25■■□□□ 1.79
PPFIBP1-204ENST00000535047 TOP2AP11388 1531 aaKnown RBP26.22■■□□□ 1.79
PPFIBP1-204ENST00000535047 ERCC6Q03468 1493 aa26.2■■□□□ 1.78
PPFIBP1-204ENST00000535047 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
PPFIBP1-204ENST00000535047 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
PPFIBP1-204ENST00000535047 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
PPFIBP1-204ENST00000535047 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
PPFIBP1-204ENST00000535047 CUX2O14529 1486 aa25.92■■□□□ 1.74
PPFIBP1-204ENST00000535047 THOC2Q8NI27 1593 aaKnown RBP25.92■■□□□ 1.74
PPFIBP1-204ENST00000535047 CFTRP13569 1480 aa25.86■■□□□ 1.73
PPFIBP1-204ENST00000535047 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
PPFIBP1-204ENST00000535047 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
PPFIBP1-204ENST00000535047 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
PPFIBP1-204ENST00000535047 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
PPFIBP1-204ENST00000535047 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
PPFIBP1-204ENST00000535047 WDR62O43379 1518 aa25.67■■□□□ 1.7
PPFIBP1-204ENST00000535047 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
PPFIBP1-204ENST00000535047 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
PPFIBP1-204ENST00000535047 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
PPFIBP1-204ENST00000535047 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
PPFIBP1-204ENST00000535047 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
PPFIBP1-204ENST00000535047 IFT140Q96RY7 1462 aa25.2■■□□□ 1.62
PPFIBP1-204ENST00000535047 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.62
PPFIBP1-204ENST00000535047 CUX1P39880 1505 aa25.13■■□□□ 1.61
PPFIBP1-204ENST00000535047 POLA1P09884 1462 aaPredicted RBP25.13■■□□□ 1.61
PPFIBP1-204ENST00000535047 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
PPFIBP1-204ENST00000535047 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
PPFIBP1-204ENST00000535047 EIF4G3O43432 1585 aaKnown RBP25.07■■□□□ 1.6
PPFIBP1-204ENST00000535047 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
PPFIBP1-204ENST00000535047 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
PPFIBP1-204ENST00000535047 SOGA1O94964 1423 aa24.97■■□□□ 1.59
PPFIBP1-204ENST00000535047 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
PPFIBP1-204ENST00000535047 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
PPFIBP1-204ENST00000535047 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.58
PPFIBP1-204ENST00000535047 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
PPFIBP1-204ENST00000535047 SYNJ1O43426 1573 aa24.91■■□□□ 1.58
PPFIBP1-204ENST00000535047 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
PPFIBP1-204ENST00000535047 TDRD9Q8NDG6 1382 aaKnown RBP24.85■■□□□ 1.57
PPFIBP1-204ENST00000535047 CHD1O14646 1710 aa24.79■■□□□ 1.56
PPFIBP1-204ENST00000535047 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
PPFIBP1-204ENST00000535047 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
PPFIBP1-204ENST00000535047 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
PPFIBP1-204ENST00000535047 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
PPFIBP1-204ENST00000535047 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
PPFIBP1-204ENST00000535047 GRIN2BQ13224 1484 aa24.73■■□□□ 1.55
PPFIBP1-204ENST00000535047 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
PPFIBP1-204ENST00000535047 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
PPFIBP1-204ENST00000535047 FBLN2P98095 1184 aa24.64■■□□□ 1.54
PPFIBP1-204ENST00000535047 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
PPFIBP1-204ENST00000535047 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
PPFIBP1-204ENST00000535047 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
PPFIBP1-204ENST00000535047 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
PPFIBP1-204ENST00000535047 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
PPFIBP1-204ENST00000535047 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
PPFIBP1-204ENST00000535047 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
PPFIBP1-204ENST00000535047 ARHGEF11O15085 1522 aa24.45■■□□□ 1.51
PPFIBP1-204ENST00000535047 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.51
PPFIBP1-204ENST00000535047 GRIN2AQ12879 1464 aa24.43■■□□□ 1.5
PPFIBP1-204ENST00000535047 FHAD1B1AJZ9 1412 aa24.42■■□□□ 1.5
PPFIBP1-204ENST00000535047 KIF27Q86VH2 1401 aa24.39■■□□□ 1.5
PPFIBP1-204ENST00000535047 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
PPFIBP1-204ENST00000535047 CEP170Q5SW79 1584 aa24.34■■□□□ 1.49
PPFIBP1-204ENST00000535047 CUL7Q14999 1698 aa24.32■■□□□ 1.48
PPFIBP1-204ENST00000535047 NUP160Q12769 1436 aa24.3■■□□□ 1.48
PPFIBP1-204ENST00000535047 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
PPFIBP1-204ENST00000535047 IGF1RP08069 1367 aa24.24■■□□□ 1.47
PPFIBP1-204ENST00000535047 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
PPFIBP1-204ENST00000535047 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
PPFIBP1-204ENST00000535047 CYB5RLQ6IPT4 315 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms