Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
WNT3AP56704 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.42□□□□□ -0.1
WNT3AP56704 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.42□□□□□ -0.1
WNT3AP56704 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.42□□□□□ -0.1
WNT3AP56704 RN7SL277P-201ENST00000481521 288 ntBASIC14.42□□□□□ -0.1
WNT3AP56704 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.42□□□□□ -0.1
WNT3AP56704 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 MIR6869-201ENST00000619434 62 ntBASIC14.42□□□□□ -0.1
WNT3AP56704 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 KRT8P21-201ENST00000430398 1491 ntBASIC14.42□□□□□ -0.1
WNT3AP56704 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
WNT3AP56704 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
WNT3AP56704 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
WNT3AP56704 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 FAM90A12P-201ENST00000519497 2375 ntBASIC14.41□□□□□ -0.1
WNT3AP56704 FAM90A24P-201ENST00000520792 2369 ntBASIC14.41□□□□□ -0.1
WNT3AP56704 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
WNT3AP56704 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 RN7SKP214-201ENST00000364208 315 ntBASIC14.41□□□□□ -0.1
WNT3AP56704 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.41□□□□□ -0.1
WNT3AP56704 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 AC092658.1-201ENST00000505836 891 ntBASIC14.41□□□□□ -0.1
WNT3AP56704 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.41□□□□□ -0.1
WNT3AP56704 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.41□□□□□ -0.1
WNT3AP56704 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.41□□□□□ -0.1
WNT3AP56704 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.41□□□□□ -0.1
WNT3AP56704 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
WNT3AP56704 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.41□□□□□ -0.1
WNT3AP56704 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 AC104581.4-201ENST00000623126 3052 ntBASIC14.4□□□□□ -0.1
WNT3AP56704 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
WNT3AP56704 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3AP56704 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms