Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
WNT3AP56704 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
WNT3AP56704 AL356512.1-201ENST00000607453 1739 ntBASIC33.67■■■□□ 2.98
WNT3AP56704 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
WNT3AP56704 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
WNT3AP56704 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.28■■■□□ 2.92
WNT3AP56704 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
WNT3AP56704 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33■■■□□ 2.87
WNT3AP56704 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33■■■□□ 2.87
WNT3AP56704 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.8■■■□□ 2.84
WNT3AP56704 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.73■■■□□ 2.83
WNT3AP56704 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.69■■■□□ 2.82
WNT3AP56704 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
WNT3AP56704 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
WNT3AP56704 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.11■■■□□ 2.73
WNT3AP56704 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
WNT3AP56704 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.82■■■□□ 2.68
WNT3AP56704 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
WNT3AP56704 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
WNT3AP56704 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.67■■■□□ 2.66
WNT3AP56704 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
WNT3AP56704 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
WNT3AP56704 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.58■■■□□ 2.65
WNT3AP56704 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.55■■■□□ 2.64
WNT3AP56704 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
WNT3AP56704 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
WNT3AP56704 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
WNT3AP56704 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
WNT3AP56704 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.3■■■□□ 2.6
WNT3AP56704 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
WNT3AP56704 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
WNT3AP56704 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.01■■■□□ 2.55
WNT3AP56704 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
WNT3AP56704 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
WNT3AP56704 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
WNT3AP56704 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.87■■■□□ 2.53
WNT3AP56704 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
WNT3AP56704 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.79■■■□□ 2.52
WNT3AP56704 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
WNT3AP56704 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
WNT3AP56704 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
WNT3AP56704 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
WNT3AP56704 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
WNT3AP56704 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
WNT3AP56704 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
WNT3AP56704 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
WNT3AP56704 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
WNT3AP56704 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
WNT3AP56704 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
WNT3AP56704 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
WNT3AP56704 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.42■■■□□ 2.46
WNT3AP56704 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.4■■■□□ 2.46
WNT3AP56704 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
WNT3AP56704 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.36■■■□□ 2.45
WNT3AP56704 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
WNT3AP56704 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.2■■■□□ 2.43
WNT3AP56704 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
WNT3AP56704 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
WNT3AP56704 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
WNT3AP56704 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
WNT3AP56704 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.1■■■□□ 2.41
WNT3AP56704 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
WNT3AP56704 AC015813.7-201ENST00000623294 581 ntBASIC30.05■■■□□ 2.4
WNT3AP56704 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.03■■■□□ 2.4
WNT3AP56704 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
WNT3AP56704 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
WNT3AP56704 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
WNT3AP56704 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
WNT3AP56704 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.87■■■□□ 2.37
WNT3AP56704 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
WNT3AP56704 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.83■■■□□ 2.37
WNT3AP56704 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
WNT3AP56704 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
WNT3AP56704 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
WNT3AP56704 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
WNT3AP56704 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.7■■■□□ 2.35
WNT3AP56704 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
WNT3AP56704 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
WNT3AP56704 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.62■■■□□ 2.33
WNT3AP56704 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
WNT3AP56704 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
WNT3AP56704 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
WNT3AP56704 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
WNT3AP56704 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
WNT3AP56704 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
WNT3AP56704 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
WNT3AP56704 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
WNT3AP56704 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
WNT3AP56704 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
WNT3AP56704 AC145285.7-201ENST00000614819 1539 ntBASIC29.42■■■□□ 2.3
WNT3AP56704 AC006077.2-201ENST00000623591 457 ntBASIC29.41■■■□□ 2.3
WNT3AP56704 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.41■■■□□ 2.3
WNT3AP56704 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
WNT3AP56704 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
WNT3AP56704 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
WNT3AP56704 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
WNT3AP56704 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
WNT3AP56704 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.29■■■□□ 2.28
WNT3AP56704 ZNRF2P1-201ENST00000441407 443 ntBASIC29.24■■■□□ 2.27
WNT3AP56704 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms