RNA–Protein interactions for RNA: ENST00000596535.3

FAM236B-201, Transcript of family with sequence similarity 236 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM236B, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM236B-201ENST00000596535 NISCHQ9Y2I1 1504 aa35.13■■■■□ 3.21
FAM236B-201ENST00000596535 CCDC180Q9P1Z9 1646 aa31.23■■■□□ 2.59
FAM236B-201ENST00000596535 ABCC9O60706 1549 aa30.71■■■□□ 2.51
FAM236B-201ENST00000596535 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
FAM236B-201ENST00000596535 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
FAM236B-201ENST00000596535 NACADO15069 1562 aa29.36■■■□□ 2.29
FAM236B-201ENST00000596535 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
FAM236B-201ENST00000596535 MYO15BQ96JP2 1530 aa29.13■■■□□ 2.25
FAM236B-201ENST00000596535 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
FAM236B-201ENST00000596535 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
FAM236B-201ENST00000596535 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
FAM236B-201ENST00000596535 SCRIBQ14160 1630 aa28.59■■■□□ 2.17
FAM236B-201ENST00000596535 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
FAM236B-201ENST00000596535 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
FAM236B-201ENST00000596535 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
FAM236B-201ENST00000596535 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
FAM236B-201ENST00000596535 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
FAM236B-201ENST00000596535 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
FAM236B-201ENST00000596535 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
FAM236B-201ENST00000596535 BAZ1AQ9NRL2 1556 aaPredicted RBP27.23■■□□□ 1.95
FAM236B-201ENST00000596535 ATAD2BQ9ULI0 1458 aa27.14■■□□□ 1.94
FAM236B-201ENST00000596535 MROH2BQ7Z745 1585 aa27.11■■□□□ 1.93
FAM236B-201ENST00000596535 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
FAM236B-201ENST00000596535 SMARCA2P51531 1590 aa27.09■■□□□ 1.93
FAM236B-201ENST00000596535 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
FAM236B-201ENST00000596535 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
FAM236B-201ENST00000596535 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
FAM236B-201ENST00000596535 WIZO95785 1651 aa26.82■■□□□ 1.88
FAM236B-201ENST00000596535 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
FAM236B-201ENST00000596535 NESP48681 1621 aa26.55■■□□□ 1.84
FAM236B-201ENST00000596535 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
FAM236B-201ENST00000596535 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
FAM236B-201ENST00000596535 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
FAM236B-201ENST00000596535 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
FAM236B-201ENST00000596535 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
FAM236B-201ENST00000596535 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
FAM236B-201ENST00000596535 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
FAM236B-201ENST00000596535 CFTRP13569 1480 aa26.17■■□□□ 1.78
FAM236B-201ENST00000596535 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
FAM236B-201ENST00000596535 CUX2O14529 1486 aa26.13■■□□□ 1.77
FAM236B-201ENST00000596535 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
FAM236B-201ENST00000596535 FANCD2Q9BXW9 1451 aa26.06■■□□□ 1.76
FAM236B-201ENST00000596535 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
FAM236B-201ENST00000596535 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
FAM236B-201ENST00000596535 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
FAM236B-201ENST00000596535 WDR62O43379 1518 aa25.9■■□□□ 1.74
FAM236B-201ENST00000596535 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
FAM236B-201ENST00000596535 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
FAM236B-201ENST00000596535 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
FAM236B-201ENST00000596535 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
FAM236B-201ENST00000596535 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
FAM236B-201ENST00000596535 CUX1P39880 1505 aa25.43■■□□□ 1.66
FAM236B-201ENST00000596535 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
FAM236B-201ENST00000596535 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
FAM236B-201ENST00000596535 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
FAM236B-201ENST00000596535 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
FAM236B-201ENST00000596535 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
FAM236B-201ENST00000596535 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
FAM236B-201ENST00000596535 SOGA1O94964 1423 aa25.3■■□□□ 1.64
FAM236B-201ENST00000596535 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
FAM236B-201ENST00000596535 AQRO60306 1485 aaKnown RBP eCLIP25.26■■□□□ 1.63
FAM236B-201ENST00000596535 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
FAM236B-201ENST00000596535 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
FAM236B-201ENST00000596535 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
FAM236B-201ENST00000596535 TOP2BQ02880 1626 aa25.18■■□□□ 1.62
FAM236B-201ENST00000596535 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
FAM236B-201ENST00000596535 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
FAM236B-201ENST00000596535 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
FAM236B-201ENST00000596535 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
FAM236B-201ENST00000596535 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
FAM236B-201ENST00000596535 GRIN2BQ13224 1484 aa25.01■■□□□ 1.59
FAM236B-201ENST00000596535 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
FAM236B-201ENST00000596535 FBLN2P98095 1184 aa25■■□□□ 1.59
FAM236B-201ENST00000596535 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
FAM236B-201ENST00000596535 CHD1O14646 1710 aa24.98■■□□□ 1.59
FAM236B-201ENST00000596535 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
FAM236B-201ENST00000596535 MAGI1Q96QZ7 1491 aaPredicted RBP24.93■■□□□ 1.58
FAM236B-201ENST00000596535 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
FAM236B-201ENST00000596535 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
FAM236B-201ENST00000596535 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
FAM236B-201ENST00000596535 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
FAM236B-201ENST00000596535 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
FAM236B-201ENST00000596535 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
FAM236B-201ENST00000596535 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
FAM236B-201ENST00000596535 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
FAM236B-201ENST00000596535 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
FAM236B-201ENST00000596535 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
FAM236B-201ENST00000596535 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
FAM236B-201ENST00000596535 CLASP1Q7Z460 1538 aa24.68■■□□□ 1.54
FAM236B-201ENST00000596535 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
FAM236B-201ENST00000596535 IGF1RP08069 1367 aa24.61■■□□□ 1.53
FAM236B-201ENST00000596535 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
FAM236B-201ENST00000596535 NUP160Q12769 1436 aa24.57■■□□□ 1.52
FAM236B-201ENST00000596535 CUL7Q14999 1698 aa24.54■■□□□ 1.52
FAM236B-201ENST00000596535 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
FAM236B-201ENST00000596535 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
FAM236B-201ENST00000596535 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
FAM236B-201ENST00000596535 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
FAM236B-201ENST00000596535 ERCC6L2Q5T890 1561 aa24.39■■□□□ 1.5
FAM236B-201ENST00000596535 SHROOM2Q13796 1616 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms