RNA–Protein interactions for RNA: ENST00000562334.5

CDIP1-202, Transcript of cell death inducing p53 target 1, humanhuman

TSL 2 BASIC

Gene CDIP1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-202ENST00000562334 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
CDIP1-202ENST00000562334 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
CDIP1-202ENST00000562334 ABCC9O60706 1549 aa31.03■■■□□ 2.56
CDIP1-202ENST00000562334 RB1CC1Q8TDY2 1594 aa29.76■■■□□ 2.35
CDIP1-202ENST00000562334 DCAF8L2P0C7V8 631 aa29.7■■■□□ 2.35
CDIP1-202ENST00000562334 NACADO15069 1562 aa29.65■■■□□ 2.34
CDIP1-202ENST00000562334 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
CDIP1-202ENST00000562334 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
CDIP1-202ENST00000562334 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
CDIP1-202ENST00000562334 UNC13AQ9UPW8 1703 aa29.13■■■□□ 2.25
CDIP1-202ENST00000562334 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
CDIP1-202ENST00000562334 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
CDIP1-202ENST00000562334 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
CDIP1-202ENST00000562334 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
CDIP1-202ENST00000562334 SHROOM4Q9ULL8 1493 aa28.47■■■□□ 2.15
CDIP1-202ENST00000562334 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
CDIP1-202ENST00000562334 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
CDIP1-202ENST00000562334 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
CDIP1-202ENST00000562334 SMARCA4P51532 1647 aa27.51■■□□□ 1.99
CDIP1-202ENST00000562334 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
CDIP1-202ENST00000562334 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
CDIP1-202ENST00000562334 NCAPD3P42695 1498 aa27.33■■□□□ 1.97
CDIP1-202ENST00000562334 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
CDIP1-202ENST00000562334 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
CDIP1-202ENST00000562334 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
CDIP1-202ENST00000562334 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
CDIP1-202ENST00000562334 BAZ1BQ9UIG0 1483 aaKnown RBP27.17■■□□□ 1.94
CDIP1-202ENST00000562334 WIZO95785 1651 aa27.01■■□□□ 1.92
CDIP1-202ENST00000562334 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
CDIP1-202ENST00000562334 NESP48681 1621 aa26.79■■□□□ 1.88
CDIP1-202ENST00000562334 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
CDIP1-202ENST00000562334 LAMC3Q9Y6N6 1575 aa26.69■■□□□ 1.86
CDIP1-202ENST00000562334 TOP2AP11388 1531 aaKnown RBP26.68■■□□□ 1.86
CDIP1-202ENST00000562334 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
CDIP1-202ENST00000562334 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
CDIP1-202ENST00000562334 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
CDIP1-202ENST00000562334 CUX2O14529 1486 aa26.48■■□□□ 1.83
CDIP1-202ENST00000562334 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
CDIP1-202ENST00000562334 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
CDIP1-202ENST00000562334 CFTRP13569 1480 aa26.36■■□□□ 1.81
CDIP1-202ENST00000562334 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
CDIP1-202ENST00000562334 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
CDIP1-202ENST00000562334 MRC2Q9UBG0 1479 aa26.25■■□□□ 1.79
CDIP1-202ENST00000562334 PRDM2Q13029 1718 aa26.24■■□□□ 1.79
CDIP1-202ENST00000562334 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
CDIP1-202ENST00000562334 WDR62O43379 1518 aa26.17■■□□□ 1.78
CDIP1-202ENST00000562334 URB2Q14146 1524 aaKnown RBP26.02■■□□□ 1.76
CDIP1-202ENST00000562334 TOPBP1Q92547 1522 aa25.83■■□□□ 1.73
CDIP1-202ENST00000562334 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
CDIP1-202ENST00000562334 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
CDIP1-202ENST00000562334 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
CDIP1-202ENST00000562334 IFT140Q96RY7 1462 aa25.71■■□□□ 1.71
CDIP1-202ENST00000562334 ZNF608Q9ULD9 1512 aaPredicted RBP25.62■■□□□ 1.69
CDIP1-202ENST00000562334 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
CDIP1-202ENST00000562334 CUX1P39880 1505 aa25.59■■□□□ 1.69
CDIP1-202ENST00000562334 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
CDIP1-202ENST00000562334 FGD5Q6ZNL6 1462 aa25.54■■□□□ 1.68
CDIP1-202ENST00000562334 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
CDIP1-202ENST00000562334 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
CDIP1-202ENST00000562334 SOGA1O94964 1423 aa25.5■■□□□ 1.67
CDIP1-202ENST00000562334 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.67
CDIP1-202ENST00000562334 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
CDIP1-202ENST00000562334 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
CDIP1-202ENST00000562334 WDR97A6NE52 1622 aa25.36■■□□□ 1.65
CDIP1-202ENST00000562334 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
CDIP1-202ENST00000562334 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
CDIP1-202ENST00000562334 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
CDIP1-202ENST00000562334 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
CDIP1-202ENST00000562334 CHD1O14646 1710 aa25.28■■□□□ 1.64
CDIP1-202ENST00000562334 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
CDIP1-202ENST00000562334 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
CDIP1-202ENST00000562334 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
CDIP1-202ENST00000562334 FBLN2P98095 1184 aa25.22■■□□□ 1.63
CDIP1-202ENST00000562334 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
CDIP1-202ENST00000562334 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
CDIP1-202ENST00000562334 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
CDIP1-202ENST00000562334 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
CDIP1-202ENST00000562334 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
CDIP1-202ENST00000562334 SYNJ2O15056 1496 aa25.08■■□□□ 1.6
CDIP1-202ENST00000562334 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
CDIP1-202ENST00000562334 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
CDIP1-202ENST00000562334 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
CDIP1-202ENST00000562334 TRIM41Q8WV44 630 aa25■■□□□ 1.59
CDIP1-202ENST00000562334 ADAMTS12P58397 1594 aa24.98■■□□□ 1.59
CDIP1-202ENST00000562334 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
CDIP1-202ENST00000562334 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
CDIP1-202ENST00000562334 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
CDIP1-202ENST00000562334 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
CDIP1-202ENST00000562334 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
CDIP1-202ENST00000562334 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
CDIP1-202ENST00000562334 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
CDIP1-202ENST00000562334 NUP160Q12769 1436 aa24.77■■□□□ 1.56
CDIP1-202ENST00000562334 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
CDIP1-202ENST00000562334 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
CDIP1-202ENST00000562334 CUL7Q14999 1698 aa24.75■■□□□ 1.55
CDIP1-202ENST00000562334 IGF1RP08069 1367 aa24.73■■□□□ 1.55
CDIP1-202ENST00000562334 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
CDIP1-202ENST00000562334 SHROOM2Q13796 1616 aa24.62■■□□□ 1.53
CDIP1-202ENST00000562334 CARMIL1Q5VZK9 1371 aa24.61■■□□□ 1.53
CDIP1-202ENST00000562334 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms