RNA–Protein interactions for RNA: ENST00000637089.1

EFHC1-227, Transcript of EF-hand domain containing 1, humanhuman

TSL 5 BASIC

Gene EFHC1, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-227ENST00000637089 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
EFHC1-227ENST00000637089 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
EFHC1-227ENST00000637089 ABCC9O60706 1549 aa29.15■■■□□ 2.26
EFHC1-227ENST00000637089 ZCCHC6Q5VYS8 1495 aaKnown RBP28.5■■■□□ 2.15
EFHC1-227ENST00000637089 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
EFHC1-227ENST00000637089 NACADO15069 1562 aa28.22■■■□□ 2.11
EFHC1-227ENST00000637089 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
EFHC1-227ENST00000637089 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
EFHC1-227ENST00000637089 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
EFHC1-227ENST00000637089 UNC13AQ9UPW8 1703 aa27.59■■■□□ 2.01
EFHC1-227ENST00000637089 SCRIBQ14160 1630 aa27.55■■■□□ 2
EFHC1-227ENST00000637089 BICRAQ9NZM4 1560 aa27.37■■□□□ 1.97
EFHC1-227ENST00000637089 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
EFHC1-227ENST00000637089 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
EFHC1-227ENST00000637089 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
EFHC1-227ENST00000637089 EIF4G1Q04637 1599 aaKnown RBP26.57■■□□□ 1.84
EFHC1-227ENST00000637089 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
EFHC1-227ENST00000637089 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
EFHC1-227ENST00000637089 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
EFHC1-227ENST00000637089 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
EFHC1-227ENST00000637089 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
EFHC1-227ENST00000637089 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
EFHC1-227ENST00000637089 ATAD2BQ9ULI0 1458 aa26.16■■□□□ 1.78
EFHC1-227ENST00000637089 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
EFHC1-227ENST00000637089 SMARCA2P51531 1590 aa26.08■■□□□ 1.77
EFHC1-227ENST00000637089 WIZO95785 1651 aa26.07■■□□□ 1.76
EFHC1-227ENST00000637089 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
EFHC1-227ENST00000637089 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
EFHC1-227ENST00000637089 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
EFHC1-227ENST00000637089 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
EFHC1-227ENST00000637089 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
EFHC1-227ENST00000637089 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
EFHC1-227ENST00000637089 NESP48681 1621 aa25.38■■□□□ 1.65
EFHC1-227ENST00000637089 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
EFHC1-227ENST00000637089 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
EFHC1-227ENST00000637089 CFTRP13569 1480 aa25.27■■□□□ 1.64
EFHC1-227ENST00000637089 PDS5BQ9NTI5 1447 aa25.1■■□□□ 1.61
EFHC1-227ENST00000637089 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
EFHC1-227ENST00000637089 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
EFHC1-227ENST00000637089 FANCD2Q9BXW9 1451 aa25.04■■□□□ 1.6
EFHC1-227ENST00000637089 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
EFHC1-227ENST00000637089 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
EFHC1-227ENST00000637089 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
EFHC1-227ENST00000637089 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
EFHC1-227ENST00000637089 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
EFHC1-227ENST00000637089 WDR62O43379 1518 aa24.75■■□□□ 1.55
EFHC1-227ENST00000637089 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
EFHC1-227ENST00000637089 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
EFHC1-227ENST00000637089 CUX1P39880 1505 aa24.67■■□□□ 1.54
EFHC1-227ENST00000637089 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
EFHC1-227ENST00000637089 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.53
EFHC1-227ENST00000637089 CUX2O14529 1486 aa24.61■■□□□ 1.53
EFHC1-227ENST00000637089 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
EFHC1-227ENST00000637089 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
EFHC1-227ENST00000637089 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
EFHC1-227ENST00000637089 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
EFHC1-227ENST00000637089 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
EFHC1-227ENST00000637089 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
EFHC1-227ENST00000637089 SOGA1O94964 1423 aa24.41■■□□□ 1.5
EFHC1-227ENST00000637089 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
EFHC1-227ENST00000637089 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
EFHC1-227ENST00000637089 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
EFHC1-227ENST00000637089 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
EFHC1-227ENST00000637089 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
EFHC1-227ENST00000637089 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
EFHC1-227ENST00000637089 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
EFHC1-227ENST00000637089 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
EFHC1-227ENST00000637089 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.47
EFHC1-227ENST00000637089 EIF4G3O43432 1585 aaKnown RBP24.21■■□□□ 1.47
EFHC1-227ENST00000637089 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
EFHC1-227ENST00000637089 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
EFHC1-227ENST00000637089 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
EFHC1-227ENST00000637089 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
EFHC1-227ENST00000637089 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
EFHC1-227ENST00000637089 PBRM1Q86U86 1689 aa24.04■■□□□ 1.44
EFHC1-227ENST00000637089 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
EFHC1-227ENST00000637089 IGF1RP08069 1367 aa23.98■■□□□ 1.43
EFHC1-227ENST00000637089 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
EFHC1-227ENST00000637089 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
EFHC1-227ENST00000637089 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
EFHC1-227ENST00000637089 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
EFHC1-227ENST00000637089 SYNJ2O15056 1496 aa23.85■■□□□ 1.41
EFHC1-227ENST00000637089 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
EFHC1-227ENST00000637089 FBLN2P98095 1184 aa23.84■■□□□ 1.41
EFHC1-227ENST00000637089 EEA1Q15075 1411 aa23.84■■□□□ 1.41
EFHC1-227ENST00000637089 CHD1O14646 1710 aa23.83■■□□□ 1.41
EFHC1-227ENST00000637089 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
EFHC1-227ENST00000637089 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
EFHC1-227ENST00000637089 CUL7Q14999 1698 aa23.81■■□□□ 1.4
EFHC1-227ENST00000637089 CARMIL1Q5VZK9 1371 aa23.81■■□□□ 1.4
EFHC1-227ENST00000637089 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
EFHC1-227ENST00000637089 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
EFHC1-227ENST00000637089 OSCARQ8IYS5 282 aa23.71■■□□□ 1.39
EFHC1-227ENST00000637089 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
EFHC1-227ENST00000637089 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
EFHC1-227ENST00000637089 NUP160Q12769 1436 aa23.65■■□□□ 1.38
EFHC1-227ENST00000637089 KIF21BO75037 1637 aa23.59■■□□□ 1.37
EFHC1-227ENST00000637089 CLASP1Q7Z460 1538 aa23.58■■□□□ 1.36
EFHC1-227ENST00000637089 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
EFHC1-227ENST00000637089 KIAA0586Q9BVV6 1533 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms