RNA–Protein interactions for RNA: ENST00000374459.5

RASGEF1A-202, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RASGEF1A, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-202ENST00000374459 NISCHQ9Y2I1 1504 aa30.61■■■□□ 2.49
RASGEF1A-202ENST00000374459 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
RASGEF1A-202ENST00000374459 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
RASGEF1A-202ENST00000374459 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
RASGEF1A-202ENST00000374459 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
RASGEF1A-202ENST00000374459 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.57
RASGEF1A-202ENST00000374459 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.56
RASGEF1A-202ENST00000374459 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
RASGEF1A-202ENST00000374459 ABCC9O60706 1549 aa24.55■■□□□ 1.52
RASGEF1A-202ENST00000374459 NACADO15069 1562 aa24.5■■□□□ 1.51
RASGEF1A-202ENST00000374459 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
RASGEF1A-202ENST00000374459 RB1CC1Q8TDY2 1594 aa24.16■■□□□ 1.46
RASGEF1A-202ENST00000374459 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
RASGEF1A-202ENST00000374459 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
RASGEF1A-202ENST00000374459 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
RASGEF1A-202ENST00000374459 HRCP23327 699 aa23.82■■□□□ 1.4
RASGEF1A-202ENST00000374459 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
RASGEF1A-202ENST00000374459 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
RASGEF1A-202ENST00000374459 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
RASGEF1A-202ENST00000374459 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
RASGEF1A-202ENST00000374459 WIZO95785 1651 aa23.57■■□□□ 1.36
RASGEF1A-202ENST00000374459 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
RASGEF1A-202ENST00000374459 SMARCA4P51532 1647 aa23.46■■□□□ 1.35
RASGEF1A-202ENST00000374459 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
RASGEF1A-202ENST00000374459 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
RASGEF1A-202ENST00000374459 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
RASGEF1A-202ENST00000374459 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
RASGEF1A-202ENST00000374459 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
RASGEF1A-202ENST00000374459 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
RASGEF1A-202ENST00000374459 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
RASGEF1A-202ENST00000374459 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
RASGEF1A-202ENST00000374459 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
RASGEF1A-202ENST00000374459 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
RASGEF1A-202ENST00000374459 TRIM41Q8WV44 630 aa23■■□□□ 1.27
RASGEF1A-202ENST00000374459 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
RASGEF1A-202ENST00000374459 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
RASGEF1A-202ENST00000374459 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
RASGEF1A-202ENST00000374459 ABCC8Q09428 1581 aa22.75■■□□□ 1.23
RASGEF1A-202ENST00000374459 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
RASGEF1A-202ENST00000374459 MYT1Q01538 1121 aa22.69■■□□□ 1.22
RASGEF1A-202ENST00000374459 EHMT2Q96KQ7 1210 aa22.67■■□□□ 1.22
RASGEF1A-202ENST00000374459 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
RASGEF1A-202ENST00000374459 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
RASGEF1A-202ENST00000374459 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
RASGEF1A-202ENST00000374459 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
RASGEF1A-202ENST00000374459 SOGA1O94964 1423 aa22.38■■□□□ 1.17
RASGEF1A-202ENST00000374459 EEA1Q15075 1411 aa22.33■■□□□ 1.17
RASGEF1A-202ENST00000374459 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
RASGEF1A-202ENST00000374459 BIVM-ERCC5R4GMW8 1640 aa22.3■■□□□ 1.16
RASGEF1A-202ENST00000374459 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
RASGEF1A-202ENST00000374459 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
RASGEF1A-202ENST00000374459 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
RASGEF1A-202ENST00000374459 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
RASGEF1A-202ENST00000374459 CFTRP13569 1480 aa22.26■■□□□ 1.15
RASGEF1A-202ENST00000374459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
RASGEF1A-202ENST00000374459 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
RASGEF1A-202ENST00000374459 KIF21BO75037 1637 aa22.14■■□□□ 1.14
RASGEF1A-202ENST00000374459 CUX1P39880 1505 aa22.14■■□□□ 1.13
RASGEF1A-202ENST00000374459 CCER1Q8TC90 406 aaPredicted RBP22.13■■□□□ 1.13
RASGEF1A-202ENST00000374459 TNIKQ9UKE5 1360 aa22.11■■□□□ 1.13
RASGEF1A-202ENST00000374459 CEP162Q5TB80 1403 aa22.08■■□□□ 1.13
RASGEF1A-202ENST00000374459 GOLGA3Q08378 1498 aa22.08■■□□□ 1.13
RASGEF1A-202ENST00000374459 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
RASGEF1A-202ENST00000374459 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
RASGEF1A-202ENST00000374459 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
RASGEF1A-202ENST00000374459 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
RASGEF1A-202ENST00000374459 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
RASGEF1A-202ENST00000374459 PRXQ9BXM0 1461 aa21.87■■□□□ 1.09
RASGEF1A-202ENST00000374459 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
RASGEF1A-202ENST00000374459 DIEXFQ68CQ4 756 aaKnown RBP21.82■■□□□ 1.08
RASGEF1A-202ENST00000374459 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
RASGEF1A-202ENST00000374459 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
RASGEF1A-202ENST00000374459 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
RASGEF1A-202ENST00000374459 NESP48681 1621 aa21.78■■□□□ 1.08
RASGEF1A-202ENST00000374459 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.08
RASGEF1A-202ENST00000374459 NEUROD1Q13562 356 aa21.77■■□□□ 1.08
RASGEF1A-202ENST00000374459 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
RASGEF1A-202ENST00000374459 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
RASGEF1A-202ENST00000374459 CLIP1P30622 1438 aa21.73■■□□□ 1.07
RASGEF1A-202ENST00000374459 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
RASGEF1A-202ENST00000374459 CUX2O14529 1486 aa21.66■■□□□ 1.06
RASGEF1A-202ENST00000374459 VPS8Q8N3P4 1428 aa21.64■■□□□ 1.05
RASGEF1A-202ENST00000374459 CENPBP07199 599 aaPredicted RBP21.64■■□□□ 1.05
RASGEF1A-202ENST00000374459 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
RASGEF1A-202ENST00000374459 IGF1RP08069 1367 aa21.62■■□□□ 1.05
RASGEF1A-202ENST00000374459 WDR97A6NE52 1622 aa21.61■■□□□ 1.05
RASGEF1A-202ENST00000374459 ZNF316A6NFI3 1004 aaPredicted RBP21.6■■□□□ 1.05
RASGEF1A-202ENST00000374459 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
RASGEF1A-202ENST00000374459 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
RASGEF1A-202ENST00000374459 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
RASGEF1A-202ENST00000374459 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
RASGEF1A-202ENST00000374459 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
RASGEF1A-202ENST00000374459 GTF3C3Q9Y5Q9 886 aa21.57■■□□□ 1.04
RASGEF1A-202ENST00000374459 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
RASGEF1A-202ENST00000374459 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
RASGEF1A-202ENST00000374459 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
RASGEF1A-202ENST00000374459 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
RASGEF1A-202ENST00000374459 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
RASGEF1A-202ENST00000374459 ABCA5Q8WWZ7 1642 aa21.45■■□□□ 1.02
RASGEF1A-202ENST00000374459 CUL7Q14999 1698 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms