RNA–Protein interactions for RNA: ENST00000419147.6

CROT-203, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 2 BASIC

Gene CROT, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-203ENST00000419147 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
CROT-203ENST00000419147 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
CROT-203ENST00000419147 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
CROT-203ENST00000419147 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
CROT-203ENST00000419147 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
CROT-203ENST00000419147 NACADO15069 1562 aa26.08■■□□□ 1.76
CROT-203ENST00000419147 ABCC9O60706 1549 aa25.84■■□□□ 1.73
CROT-203ENST00000419147 RB1CC1Q8TDY2 1594 aa25.76■■□□□ 1.71
CROT-203ENST00000419147 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
CROT-203ENST00000419147 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
CROT-203ENST00000419147 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
CROT-203ENST00000419147 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
CROT-203ENST00000419147 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
CROT-203ENST00000419147 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
CROT-203ENST00000419147 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
CROT-203ENST00000419147 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
CROT-203ENST00000419147 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
CROT-203ENST00000419147 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
CROT-203ENST00000419147 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
CROT-203ENST00000419147 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.49
CROT-203ENST00000419147 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
CROT-203ENST00000419147 SMARCA2P51531 1590 aa24.14■■□□□ 1.45
CROT-203ENST00000419147 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
CROT-203ENST00000419147 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
CROT-203ENST00000419147 WIZO95785 1651 aa24.12■■□□□ 1.45
CROT-203ENST00000419147 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
CROT-203ENST00000419147 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
CROT-203ENST00000419147 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
CROT-203ENST00000419147 NCAPD3P42695 1498 aa23.96■■□□□ 1.43
CROT-203ENST00000419147 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
CROT-203ENST00000419147 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
CROT-203ENST00000419147 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
CROT-203ENST00000419147 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
CROT-203ENST00000419147 CFTRP13569 1480 aa23.33■■□□□ 1.32
CROT-203ENST00000419147 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
CROT-203ENST00000419147 LAMC3Q9Y6N6 1575 aa23.22■■□□□ 1.31
CROT-203ENST00000419147 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
CROT-203ENST00000419147 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
CROT-203ENST00000419147 HRCP23327 699 aa23.12■■□□□ 1.29
CROT-203ENST00000419147 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
CROT-203ENST00000419147 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
CROT-203ENST00000419147 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
CROT-203ENST00000419147 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
CROT-203ENST00000419147 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
CROT-203ENST00000419147 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
CROT-203ENST00000419147 TRIM26Q12899 539 aaPredicted RBP22.86■■□□□ 1.25
CROT-203ENST00000419147 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
CROT-203ENST00000419147 DNMBPQ6XZF7 1577 aa22.83■■□□□ 1.24
CROT-203ENST00000419147 CUX1P39880 1505 aa22.82■■□□□ 1.24
CROT-203ENST00000419147 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
CROT-203ENST00000419147 EEA1Q15075 1411 aa22.81■■□□□ 1.24
CROT-203ENST00000419147 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
CROT-203ENST00000419147 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.23
CROT-203ENST00000419147 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
CROT-203ENST00000419147 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
CROT-203ENST00000419147 NESP48681 1621 aa22.7■■□□□ 1.23
CROT-203ENST00000419147 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
CROT-203ENST00000419147 WDR62O43379 1518 aa22.64■■□□□ 1.22
CROT-203ENST00000419147 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
CROT-203ENST00000419147 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
CROT-203ENST00000419147 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
CROT-203ENST00000419147 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.21
CROT-203ENST00000419147 KIF21BO75037 1637 aa22.56■■□□□ 1.2
CROT-203ENST00000419147 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
CROT-203ENST00000419147 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
CROT-203ENST00000419147 EHMT2Q96KQ7 1210 aa22.49■■□□□ 1.19
CROT-203ENST00000419147 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
CROT-203ENST00000419147 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
CROT-203ENST00000419147 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
CROT-203ENST00000419147 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
CROT-203ENST00000419147 PPARGC1BQ86YN6 1023 aaKnown RBP22.45■■□□□ 1.18
CROT-203ENST00000419147 SOGA1O94964 1423 aa22.45■■□□□ 1.18
CROT-203ENST00000419147 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
CROT-203ENST00000419147 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
CROT-203ENST00000419147 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
CROT-203ENST00000419147 CUL7Q14999 1698 aa22.36■■□□□ 1.17
CROT-203ENST00000419147 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
CROT-203ENST00000419147 CEP162Q5TB80 1403 aa22.33■■□□□ 1.17
CROT-203ENST00000419147 IFT140Q96RY7 1462 aa22.33■■□□□ 1.16
CROT-203ENST00000419147 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.16
CROT-203ENST00000419147 CUX2O14529 1486 aa22.31■■□□□ 1.16
CROT-203ENST00000419147 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
CROT-203ENST00000419147 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
CROT-203ENST00000419147 PBRM1Q86U86 1689 aa22.24■■□□□ 1.15
CROT-203ENST00000419147 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
CROT-203ENST00000419147 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
CROT-203ENST00000419147 IGF1RP08069 1367 aa22.16■■□□□ 1.14
CROT-203ENST00000419147 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
CROT-203ENST00000419147 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
CROT-203ENST00000419147 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
CROT-203ENST00000419147 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.13
CROT-203ENST00000419147 RAPGEF2Q9Y4G8 1499 aa22.08■■□□□ 1.13
CROT-203ENST00000419147 GRIN2BQ13224 1484 aa22.05■■□□□ 1.12
CROT-203ENST00000419147 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
CROT-203ENST00000419147 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
CROT-203ENST00000419147 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
CROT-203ENST00000419147 CARMIL1Q5VZK9 1371 aa21.97■■□□□ 1.11
CROT-203ENST00000419147 CLIP1P30622 1438 aa21.95■■□□□ 1.1
CROT-203ENST00000419147 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
CROT-203ENST00000419147 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms