Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CCNT1O60563 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCNT1O60563 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CCNT1O60563 AL356740.2-201ENST00000601559 647 ntBASIC25.69■■□□□ 1.7
CCNT1O60563 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.69■■□□□ 1.7
CCNT1O60563 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.69■■□□□ 1.7
CCNT1O60563 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCNT1O60563 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCNT1O60563 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.68■■□□□ 1.7
CCNT1O60563 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
CCNT1O60563 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.68■■□□□ 1.7
CCNT1O60563 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCNT1O60563 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CCNT1O60563 MIR3621-201ENST00000580529 85 ntBASIC25.68■■□□□ 1.7
CCNT1O60563 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.68■■□□□ 1.7
CCNT1O60563 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCNT1O60563 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCNT1O60563 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CCNT1O60563 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCNT1O60563 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCNT1O60563 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCNT1O60563 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CCNT1O60563 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.67■■□□□ 1.7
CCNT1O60563 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.67■■□□□ 1.7
CCNT1O60563 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.67■■□□□ 1.7
CCNT1O60563 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCNT1O60563 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCNT1O60563 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.66■■□□□ 1.7
CCNT1O60563 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.66■■□□□ 1.7
CCNT1O60563 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCNT1O60563 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCNT1O60563 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.66■■□□□ 1.7
CCNT1O60563 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCNT1O60563 AC131212.1-201ENST00000613771 668 ntBASIC25.66■■□□□ 1.7
CCNT1O60563 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.66■■□□□ 1.7
CCNT1O60563 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.66■■□□□ 1.7
CCNT1O60563 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCNT1O60563 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CCNT1O60563 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCNT1O60563 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCNT1O60563 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCNT1O60563 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.65■■□□□ 1.7
CCNT1O60563 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.65■■□□□ 1.7
CCNT1O60563 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.65■■□□□ 1.7
CCNT1O60563 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.65■■□□□ 1.7
CCNT1O60563 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCNT1O60563 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCNT1O60563 AC009102.2-201ENST00000606772 1639 ntBASIC25.64■■□□□ 1.7
CCNT1O60563 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.64■■□□□ 1.7
CCNT1O60563 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CCNT1O60563 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCNT1O60563 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCNT1O60563 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCNT1O60563 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNT1O60563 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.63■■□□□ 1.69
CCNT1O60563 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.63■■□□□ 1.69
CCNT1O60563 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCNT1O60563 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNT1O60563 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNT1O60563 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.63■■□□□ 1.69
CCNT1O60563 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.63■■□□□ 1.69
CCNT1O60563 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNT1O60563 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNT1O60563 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCNT1O60563 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCNT1O60563 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCNT1O60563 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCNT1O60563 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.62■■□□□ 1.69
CCNT1O60563 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.62■■□□□ 1.69
CCNT1O60563 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCNT1O60563 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCNT1O60563 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.62■■□□□ 1.69
CCNT1O60563 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CCNT1O60563 ANOS2P-203ENST00000472227 1816 ntBASIC25.61■■□□□ 1.69
CCNT1O60563 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.61■■□□□ 1.69
CCNT1O60563 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.61■■□□□ 1.69
CCNT1O60563 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.61■■□□□ 1.69
CCNT1O60563 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.61■■□□□ 1.69
CCNT1O60563 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.61■■□□□ 1.69
CCNT1O60563 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNT1O60563 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCNT1O60563 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.6■■□□□ 1.69
CCNT1O60563 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.6■■□□□ 1.69
CCNT1O60563 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNT1O60563 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCNT1O60563 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.6■■□□□ 1.69
CCNT1O60563 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCNT1O60563 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNT1O60563 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCNT1O60563 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNT1O60563 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCNT1O60563 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms