RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 NISCHQ9Y2I1 1504 aa47.61■■■■■ 5.21
BRD3-202ENST00000371834 SHROOM4Q9ULL8 1493 aa40.63■■■■■ 4.09
BRD3-202ENST00000371834 CCDC180Q9P1Z9 1646 aa40.46■■■■■ 4.07
BRD3-202ENST00000371834 ZCCHC6Q5VYS8 1495 aaKnown RBP40.26■■■■■ 4.03
BRD3-202ENST00000371834 SUPT5HO00267 1087 aaKnown RBP39.81■■■■□ 3.96
BRD3-202ENST00000371834 DCAF8L2P0C7V8 631 aa39.54■■■■□ 3.92
BRD3-202ENST00000371834 DCAF1Q9Y4B6 1507 aa39.01■■■■□ 3.84
BRD3-202ENST00000371834 CHIC1Q5VXU3 224 aa38.67■■■■□ 3.78
BRD3-202ENST00000371834 MYO15BQ96JP2 1530 aa38.55■■■■□ 3.76
BRD3-202ENST00000371834 SCRIBQ14160 1630 aa37.99■■■■□ 3.67
BRD3-202ENST00000371834 ABCC9O60706 1549 aa37.98■■■■□ 3.67
BRD3-202ENST00000371834 RSF1Q96T23 1441 aaPredicted RBP37.68■■■■□ 3.62
BRD3-202ENST00000371834 LOC105371045A0A1W2PR82 267 aa37.56■■■■□ 3.6
BRD3-202ENST00000371834 PCGF6Q9BYE7 350 aa37.44■■■■□ 3.58
BRD3-202ENST00000371834 NACADO15069 1562 aa37.42■■■■□ 3.58
BRD3-202ENST00000371834 HRCP23327 699 aa37.38■■■■□ 3.57
BRD3-202ENST00000371834 RB1CC1Q8TDY2 1594 aa37.29■■■■□ 3.56
BRD3-202ENST00000371834 CECR2Q9BXF3 1484 aa37.18■■■■□ 3.54
BRD3-202ENST00000371834 TRIM41Q8WV44 630 aa37.05■■■■□ 3.52
BRD3-202ENST00000371834 MROH2BQ7Z745 1585 aa37.04■■■■□ 3.52
BRD3-202ENST00000371834 WIZO95785 1651 aa36.85■■■■□ 3.49
BRD3-202ENST00000371834 FAM9AQ8IZU1 332 aaPredicted RBP36.8■■■■□ 3.48
BRD3-202ENST00000371834 TRIM26Q12899 539 aaPredicted RBP36.69■■■■□ 3.46
BRD3-202ENST00000371834 PPARGC1BQ86YN6 1023 aaKnown RBP36.69■■■■□ 3.46
BRD3-202ENST00000371834 BAZ1AQ9NRL2 1556 aaPredicted RBP36.57■■■■□ 3.45
BRD3-202ENST00000371834 EHMT2Q96KQ7 1210 aa36.52■■■■□ 3.44
BRD3-202ENST00000371834 UNC13AQ9UPW8 1703 aa36.33■■■■□ 3.41
BRD3-202ENST00000371834 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.4
BRD3-202ENST00000371834 SMARCA4P51532 1647 aa36.27■■■■□ 3.4
BRD3-202ENST00000371834 TOP2AP11388 1531 aaKnown RBP36.23■■■■□ 3.39
BRD3-202ENST00000371834 CCDC88BA6NC98 1476 aa36.11■■■■□ 3.37
BRD3-202ENST00000371834 SMARCA2P51531 1590 aa36.05■■■■□ 3.36
BRD3-202ENST00000371834 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
BRD3-202ENST00000371834 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
BRD3-202ENST00000371834 BICRAQ9NZM4 1560 aa35.88■■■■□ 3.33
BRD3-202ENST00000371834 ZEB1P37275 1124 aaPredicted RBP35.82■■■■□ 3.32
BRD3-202ENST00000371834 SOGA1O94964 1423 aa35.67■■■■□ 3.3
BRD3-202ENST00000371834 PEG3Q9GZU2 1588 aa35.54■■■■□ 3.28
BRD3-202ENST00000371834 RUSC2Q8N2Y8 1516 aa35.52■■■■□ 3.28
BRD3-202ENST00000371834 CEP162Q5TB80 1403 aa35.46■■■■□ 3.27
BRD3-202ENST00000371834 CSRNP3Q8WYN3 585 aa35.44■■■■□ 3.26
BRD3-202ENST00000371834 EEA1Q15075 1411 aa35.4■■■■□ 3.26
BRD3-202ENST00000371834 TNIKQ9UKE5 1360 aa35.39■■■■□ 3.26
BRD3-202ENST00000371834 WRNQ14191 1432 aaPredicted RBP eCLIP35.38■■■■□ 3.25
BRD3-202ENST00000371834 ATAD2BQ9ULI0 1458 aa35.35■■■■□ 3.25
BRD3-202ENST00000371834 TTBK1Q5TCY1 1321 aaPredicted RBP35.32■■■■□ 3.25
BRD3-202ENST00000371834 UBTFP17480 764 aaKnown RBP35.31■■■■□ 3.24
BRD3-202ENST00000371834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.3■■■■□ 3.24
BRD3-202ENST00000371834 BAZ1BQ9UIG0 1483 aaKnown RBP35.25■■■■□ 3.23
BRD3-202ENST00000371834 SYNJ1O43426 1573 aa35.24■■■■□ 3.23
BRD3-202ENST00000371834 GOLGA3Q08378 1498 aa35.2■■■■□ 3.23
BRD3-202ENST00000371834 CCER1Q8TC90 406 aaPredicted RBP35.17■■■■□ 3.22
BRD3-202ENST00000371834 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
BRD3-202ENST00000371834 KIF21BO75037 1637 aa34.95■■■■□ 3.19
BRD3-202ENST00000371834 CLIP1P30622 1438 aa34.82■■■■□ 3.16
BRD3-202ENST00000371834 RAPGEF2Q9Y4G8 1499 aa34.8■■■■□ 3.16
BRD3-202ENST00000371834 TOP2BQ02880 1626 aa34.77■■■■□ 3.16
BRD3-202ENST00000371834 RANGAP1P46060 587 aaPredicted RBP34.67■■■■□ 3.14
BRD3-202ENST00000371834 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
BRD3-202ENST00000371834 VPS8Q8N3P4 1428 aa34.64■■■■□ 3.14
BRD3-202ENST00000371834 BIVM-ERCC5R4GMW8 1640 aa34.64■■■■□ 3.14
BRD3-202ENST00000371834 HMGXB3Q12766 1538 aa34.62■■■■□ 3.13
BRD3-202ENST00000371834 HNRNPUL2Q1KMD3 747 aaKnown RBP34.52■■■■□ 3.12
BRD3-202ENST00000371834 CUX1P39880 1505 aa34.48■■■■□ 3.11
BRD3-202ENST00000371834 APLP2Q06481 763 aa34.47■■■■□ 3.11
BRD3-202ENST00000371834 DIEXFQ68CQ4 756 aaKnown RBP34.44■■■■□ 3.1
BRD3-202ENST00000371834 PRXQ9BXM0 1461 aa34.43■■■■□ 3.1
BRD3-202ENST00000371834 SCAF1Q9H7N4 1312 aaKnown RBP34.43■■■■□ 3.1
BRD3-202ENST00000371834 ERICH3Q5RHP9 1530 aa34.39■■■■□ 3.1
BRD3-202ENST00000371834 CFTRP13569 1480 aa34.37■■■■□ 3.09
BRD3-202ENST00000371834 KIF27Q86VH2 1401 aa34.28■■■■□ 3.08
BRD3-202ENST00000371834 ARAP1Q96P48 1450 aa34.28■■■■□ 3.08
BRD3-202ENST00000371834 ZNF316A6NFI3 1004 aaPredicted RBP34.2■■■■□ 3.06
BRD3-202ENST00000371834 KANK4Q5T7N3 995 aaPredicted RBP34.11■■■■□ 3.05
BRD3-202ENST00000371834 ACIN1Q9UKV3 1341 aaKnown RBP34.11■■■■□ 3.05
BRD3-202ENST00000371834 NEUROD1Q13562 356 aa34.1■■■■□ 3.05
BRD3-202ENST00000371834 PRDM2Q13029 1718 aa34.06■■■■□ 3.04
BRD3-202ENST00000371834 CADPSQ9ULU8 1353 aa34■■■■□ 3.03
BRD3-202ENST00000371834 CUX2O14529 1486 aa33.99■■■■□ 3.03
BRD3-202ENST00000371834 ARHGAP35Q9NRY4 1499 aa33.99■■■■□ 3.03
BRD3-202ENST00000371834 IGF1RP08069 1367 aa33.94■■■■□ 3.02
BRD3-202ENST00000371834 CENPBP07199 599 aaPredicted RBP33.88■■■■□ 3.01
BRD3-202ENST00000371834 FGD5Q6ZNL6 1462 aa33.87■■■■□ 3.01
BRD3-202ENST00000371834 RRBP1Q9P2E9 1410 aaKnown RBP33.83■■■■□ 3.01
BRD3-202ENST00000371834 CC2D2AQ9P2K1 1620 aa33.82■■■■□ 3.01
BRD3-202ENST00000371834 DHX57Q6P158 1386 aaKnown RBP33.82■■■■□ 3
BRD3-202ENST00000371834 CARMIL1Q5VZK9 1371 aa33.79■■■■□ 3
BRD3-202ENST00000371834 MIER1Q8N108 512 aa33.74■■■□□ 2.99
BRD3-202ENST00000371834 GTF3C3Q9Y5Q9 886 aa33.73■■■□□ 2.99
BRD3-202ENST00000371834 CCNB3Q8WWL7 1395 aa33.71■■■□□ 2.99
BRD3-202ENST00000371834 CLSPNQ9HAW4 1339 aa33.7■■■□□ 2.99
BRD3-202ENST00000371834 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
BRD3-202ENST00000371834 YTHDC1Q96MU7 727 aaKnown RBP33.67■■■□□ 2.98
BRD3-202ENST00000371834 ITGAEP38570 1179 aa33.64■■■□□ 2.98
BRD3-202ENST00000371834 TIAM1Q13009 1591 aa33.59■■■□□ 2.97
BRD3-202ENST00000371834 RAD54L2Q9Y4B4 1467 aa33.56■■■□□ 2.96
BRD3-202ENST00000371834 P3H3Q8IVL6 736 aa33.52■■■□□ 2.96
BRD3-202ENST00000371834 NESP48681 1621 aa33.51■■■□□ 2.96
BRD3-202ENST00000371834 MAP3K1Q13233 1512 aa33.51■■■□□ 2.95
BRD3-202ENST00000371834 DNMBPQ6XZF7 1577 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms