RNA–Protein interactions for RNA: ENST00000368808.3

MMP21-201, Transcript of matrix metallopeptidase 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP21, Length 1,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP21-201ENST00000368808 NISCHQ9Y2I1 1504 aa51.82■■■■■ 5.89
MMP21-201ENST00000368808 CCDC180Q9P1Z9 1646 aa45.21■■■■■ 4.83
MMP21-201ENST00000368808 ZCCHC6Q5VYS8 1495 aaKnown RBP43.46■■■■■ 4.55
MMP21-201ENST00000368808 ABCC9O60706 1549 aa43.27■■■■■ 4.52
MMP21-201ENST00000368808 DCAF8L2P0C7V8 631 aa43.03■■■■■ 4.48
MMP21-201ENST00000368808 DCAF1Q9Y4B6 1507 aa42.73■■■■■ 4.43
MMP21-201ENST00000368808 MYO15BQ96JP2 1530 aa42.32■■■■■ 4.37
MMP21-201ENST00000368808 NACADO15069 1562 aa42.21■■■■■ 4.35
MMP21-201ENST00000368808 SHROOM4Q9ULL8 1493 aa42.21■■■■■ 4.35
MMP21-201ENST00000368808 RB1CC1Q8TDY2 1594 aa41.93■■■■■ 4.3
MMP21-201ENST00000368808 SCRIBQ14160 1630 aa41.7■■■■■ 4.27
MMP21-201ENST00000368808 UNC13AQ9UPW8 1703 aa41.22■■■■■ 4.19
MMP21-201ENST00000368808 BICRAQ9NZM4 1560 aa40.84■■■■■ 4.13
MMP21-201ENST00000368808 PABPN1Q86U42 306 aaKnown RBP eCLIP40.82■■■■■ 4.13
MMP21-201ENST00000368808 CECR2Q9BXF3 1484 aa40.43■■■■■ 4.06
MMP21-201ENST00000368808 SUPT5HO00267 1087 aaKnown RBP40.4■■■■■ 4.06
MMP21-201ENST00000368808 RSF1Q96T23 1441 aaPredicted RBP40.13■■■■■ 4.02
MMP21-201ENST00000368808 MROH2BQ7Z745 1585 aa40.11■■■■■ 4.01
MMP21-201ENST00000368808 BAZ1AQ9NRL2 1556 aaPredicted RBP39.97■■■■□ 3.99
MMP21-201ENST00000368808 SMARCA4P51532 1647 aa39.9■■■■□ 3.98
MMP21-201ENST00000368808 WIZO95785 1651 aa39.76■■■■□ 3.96
MMP21-201ENST00000368808 EIF4G1Q04637 1599 aaKnown RBP39.58■■■■□ 3.93
MMP21-201ENST00000368808 PEG3Q9GZU2 1588 aa39.38■■■■□ 3.89
MMP21-201ENST00000368808 ATAD2BQ9ULI0 1458 aa39.36■■■■□ 3.89
MMP21-201ENST00000368808 TOP2AP11388 1531 aaKnown RBP39.22■■■■□ 3.87
MMP21-201ENST00000368808 SMARCA2P51531 1590 aa39.21■■■■□ 3.87
MMP21-201ENST00000368808 CC2D2AQ9P2K1 1620 aa39.1■■■■□ 3.85
MMP21-201ENST00000368808 BAZ1BQ9UIG0 1483 aaKnown RBP39.06■■■■□ 3.84
MMP21-201ENST00000368808 NCAPD3P42695 1498 aa39.04■■■■□ 3.84
MMP21-201ENST00000368808 CCDC88BA6NC98 1476 aa38.91■■■■□ 3.82
MMP21-201ENST00000368808 HMGXB3Q12766 1538 aa38.89■■■■□ 3.82
MMP21-201ENST00000368808 DNAJC5BQ9UF47 199 aa38.64■■■■□ 3.78
MMP21-201ENST00000368808 CHIC1Q5VXU3 224 aa38.48■■■■□ 3.75
MMP21-201ENST00000368808 CFTRP13569 1480 aa38.09■■■■□ 3.69
MMP21-201ENST00000368808 ABCC8Q09428 1581 aa38.03■■■■□ 3.68
MMP21-201ENST00000368808 CADPSQ9ULU8 1353 aa38.03■■■■□ 3.68
MMP21-201ENST00000368808 NESP48681 1621 aa37.94■■■■□ 3.66
MMP21-201ENST00000368808 TRIM41Q8WV44 630 aa37.92■■■■□ 3.66
MMP21-201ENST00000368808 PRDM2Q13029 1718 aa37.77■■■■□ 3.64
MMP21-201ENST00000368808 WRNQ14191 1432 aaPredicted RBP eCLIP37.72■■■■□ 3.63
MMP21-201ENST00000368808 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.63
MMP21-201ENST00000368808 SYNJ1O43426 1573 aa37.65■■■■□ 3.62
MMP21-201ENST00000368808 FANCD2Q9BXW9 1451 aa37.62■■■■□ 3.61
MMP21-201ENST00000368808 CUX1P39880 1505 aa37.5■■■■□ 3.59
MMP21-201ENST00000368808 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
MMP21-201ENST00000368808 PDS5BQ9NTI5 1447 aa37.43■■■■□ 3.58
MMP21-201ENST00000368808 KIF21AQ7Z4S6 1674 aa37.38■■■■□ 3.58
MMP21-201ENST00000368808 BIVM-ERCC5R4GMW8 1640 aa37.38■■■■□ 3.57
MMP21-201ENST00000368808 CEP164Q9UPV0 1460 aa37.36■■■■□ 3.57
MMP21-201ENST00000368808 FAM9AQ8IZU1 332 aaPredicted RBP37.35■■■■□ 3.57
MMP21-201ENST00000368808 SOGA1O94964 1423 aa37.26■■■■□ 3.56
MMP21-201ENST00000368808 URB2Q14146 1524 aaKnown RBP37.22■■■■□ 3.55
MMP21-201ENST00000368808 RUSC2Q8N2Y8 1516 aa37.2■■■■□ 3.55
MMP21-201ENST00000368808 TOPBP1Q92547 1522 aa37.18■■■■□ 3.54
MMP21-201ENST00000368808 DNMBPQ6XZF7 1577 aa37.16■■■■□ 3.54
MMP21-201ENST00000368808 FGD5Q6ZNL6 1462 aa37.11■■■■□ 3.53
MMP21-201ENST00000368808 LOC105371045A0A1W2PR82 267 aa37.1■■■■□ 3.53
MMP21-201ENST00000368808 ERCC6Q03468 1493 aa37.03■■■■□ 3.52
MMP21-201ENST00000368808 MRC2Q9UBG0 1479 aa37■■■■□ 3.51
MMP21-201ENST00000368808 POLA1P09884 1462 aaPredicted RBP37■■■■□ 3.51
MMP21-201ENST00000368808 RAD54L2Q9Y4B4 1467 aa36.94■■■■□ 3.5
MMP21-201ENST00000368808 EHMT2Q96KQ7 1210 aa36.93■■■■□ 3.5
MMP21-201ENST00000368808 EEA1Q15075 1411 aa36.86■■■■□ 3.49
MMP21-201ENST00000368808 CSRNP3Q8WYN3 585 aa36.86■■■■□ 3.49
MMP21-201ENST00000368808 THOC2Q8NI27 1593 aaKnown RBP36.84■■■■□ 3.49
MMP21-201ENST00000368808 WDR62O43379 1518 aa36.83■■■■□ 3.49
MMP21-201ENST00000368808 CUX2O14529 1486 aa36.8■■■■□ 3.48
MMP21-201ENST00000368808 KIF27Q86VH2 1401 aa36.75■■■■□ 3.47
MMP21-201ENST00000368808 ABCA10Q8WWZ4 1543 aa36.73■■■■□ 3.47
MMP21-201ENST00000368808 TARBP1Q13395 1621 aaKnown RBP36.66■■■■□ 3.46
MMP21-201ENST00000368808 WDR97A6NE52 1622 aa36.65■■■■□ 3.46
MMP21-201ENST00000368808 TDRD9Q8NDG6 1382 aaKnown RBP36.6■■■■□ 3.45
MMP21-201ENST00000368808 IGF1RP08069 1367 aa36.57■■■■□ 3.45
MMP21-201ENST00000368808 PRXQ9BXM0 1461 aa36.49■■■■□ 3.43
MMP21-201ENST00000368808 KIF21BO75037 1637 aa36.48■■■■□ 3.43
MMP21-201ENST00000368808 RAPGEF2Q9Y4G8 1499 aa36.48■■■■□ 3.43
MMP21-201ENST00000368808 IFT140Q96RY7 1462 aa36.48■■■■□ 3.43
MMP21-201ENST00000368808 ABCA5Q8WWZ7 1642 aa36.47■■■■□ 3.43
MMP21-201ENST00000368808 ZNF608Q9ULD9 1512 aaPredicted RBP36.45■■■■□ 3.43
MMP21-201ENST00000368808 AQRO60306 1485 aaKnown RBP eCLIP36.43■■■■□ 3.42
MMP21-201ENST00000368808 GOLGA3Q08378 1498 aa36.43■■■■□ 3.42
MMP21-201ENST00000368808 GAPVD1Q14C86 1478 aa36.42■■■■□ 3.42
MMP21-201ENST00000368808 UBTFP17480 764 aaKnown RBP36.36■■■■□ 3.41
MMP21-201ENST00000368808 CARMIL1Q5VZK9 1371 aa36.33■■■■□ 3.41
MMP21-201ENST00000368808 ERICH3Q5RHP9 1530 aa36.28■■■■□ 3.4
MMP21-201ENST00000368808 TNIKQ9UKE5 1360 aa36.28■■■■□ 3.4
MMP21-201ENST00000368808 EIF4G3O43432 1585 aaKnown RBP36.22■■■■□ 3.39
MMP21-201ENST00000368808 PBRM1Q86U86 1689 aa36.21■■■■□ 3.39
MMP21-201ENST00000368808 CUL7Q14999 1698 aa36.16■■■■□ 3.38
MMP21-201ENST00000368808 GRIN2BQ13224 1484 aa36.15■■■■□ 3.38
MMP21-201ENST00000368808 CEP162Q5TB80 1403 aa36.1■■■■□ 3.37
MMP21-201ENST00000368808 RANGAP1P46060 587 aaPredicted RBP36.02■■■■□ 3.36
MMP21-201ENST00000368808 SNAPC4Q5SXM2 1469 aa36.02■■■■□ 3.36
MMP21-201ENST00000368808 ADAMTS12P58397 1594 aa36.02■■■■□ 3.36
MMP21-201ENST00000368808 FHAD1B1AJZ9 1412 aa35.98■■■■□ 3.35
MMP21-201ENST00000368808 CLIP1P30622 1438 aa35.88■■■■□ 3.33
MMP21-201ENST00000368808 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
MMP21-201ENST00000368808 SYNJ2O15056 1496 aa35.75■■■■□ 3.31
MMP21-201ENST00000368808 CTTNBP2Q8WZ74 1663 aa35.75■■■■□ 3.31
MMP21-201ENST00000368808 GRIN2AQ12879 1464 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms