Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AC018529.2-202ENST00000611482 3087 ntBASIC15.06■□□□□ 0
SHKBP1Q8TBC3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 MRPL22P1-201ENST00000505398 616 ntBASIC15.06■□□□□ 0
SHKBP1Q8TBC3 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AC084781.1-201ENST00000613737 656 ntBASIC15.06■□□□□ 0
SHKBP1Q8TBC3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AL591471.1-201ENST00000621855 229 ntBASIC15.06■□□□□ 0
SHKBP1Q8TBC3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AC089987.1-201ENST00000551654 2209 ntBASIC15.06■□□□□ 0
SHKBP1Q8TBC3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SHKBP1Q8TBC3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.05■□□□□ 0
SHKBP1Q8TBC3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 KRT8P1-201ENST00000557533 1207 ntBASIC15.05■□□□□ -0
SHKBP1Q8TBC3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.05■□□□□ -0
SHKBP1Q8TBC3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.05■□□□□ -0
SHKBP1Q8TBC3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 COL6A4P2-202ENST00000504443 2753 ntBASIC15.05■□□□□ -0
SHKBP1Q8TBC3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SHKBP1Q8TBC3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SHKBP1Q8TBC3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms