RNA–Protein interactions for RNA: ENST00000434081.1

LINC00163-201, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best) BASIC

Gene LINC00163, Length 2,155 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-201ENST00000434081 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
LINC00163-201ENST00000434081 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
LINC00163-201ENST00000434081 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
LINC00163-201ENST00000434081 SHROOM4Q9ULL8 1493 aa26.37■■□□□ 1.81
LINC00163-201ENST00000434081 DCAF1Q9Y4B6 1507 aa25.97■■□□□ 1.75
LINC00163-201ENST00000434081 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
LINC00163-201ENST00000434081 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
LINC00163-201ENST00000434081 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
LINC00163-201ENST00000434081 ABCC9O60706 1549 aa25.19■■□□□ 1.62
LINC00163-201ENST00000434081 NACADO15069 1562 aa25.11■■□□□ 1.61
LINC00163-201ENST00000434081 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
LINC00163-201ENST00000434081 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
LINC00163-201ENST00000434081 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
LINC00163-201ENST00000434081 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
LINC00163-201ENST00000434081 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
LINC00163-201ENST00000434081 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
LINC00163-201ENST00000434081 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
LINC00163-201ENST00000434081 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
LINC00163-201ENST00000434081 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
LINC00163-201ENST00000434081 WIZO95785 1651 aa24.19■■□□□ 1.46
LINC00163-201ENST00000434081 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
LINC00163-201ENST00000434081 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
LINC00163-201ENST00000434081 HRCP23327 699 aa24.06■■□□□ 1.44
LINC00163-201ENST00000434081 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
LINC00163-201ENST00000434081 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
LINC00163-201ENST00000434081 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
LINC00163-201ENST00000434081 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
LINC00163-201ENST00000434081 FAM9AQ8IZU1 332 aaPredicted RBP23.82■■□□□ 1.4
LINC00163-201ENST00000434081 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
LINC00163-201ENST00000434081 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
LINC00163-201ENST00000434081 SMARCA2P51531 1590 aa23.73■■□□□ 1.39
LINC00163-201ENST00000434081 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
LINC00163-201ENST00000434081 PEG3Q9GZU2 1588 aa23.7■■□□□ 1.39
LINC00163-201ENST00000434081 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
LINC00163-201ENST00000434081 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
LINC00163-201ENST00000434081 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
LINC00163-201ENST00000434081 ABCC8Q09428 1581 aa23.45■■□□□ 1.34
LINC00163-201ENST00000434081 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
LINC00163-201ENST00000434081 SOGA1O94964 1423 aa23.22■■□□□ 1.31
LINC00163-201ENST00000434081 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
LINC00163-201ENST00000434081 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
LINC00163-201ENST00000434081 NCAPD3P42695 1498 aa23.2■■□□□ 1.3
LINC00163-201ENST00000434081 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
LINC00163-201ENST00000434081 EEA1Q15075 1411 aa23.17■■□□□ 1.3
LINC00163-201ENST00000434081 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
LINC00163-201ENST00000434081 RUSC2Q8N2Y8 1516 aa23.09■■□□□ 1.29
LINC00163-201ENST00000434081 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
LINC00163-201ENST00000434081 TNIKQ9UKE5 1360 aa23.08■■□□□ 1.29
LINC00163-201ENST00000434081 CEP162Q5TB80 1403 aa23.08■■□□□ 1.28
LINC00163-201ENST00000434081 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
LINC00163-201ENST00000434081 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
LINC00163-201ENST00000434081 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
LINC00163-201ENST00000434081 CFTRP13569 1480 aa22.87■■□□□ 1.25
LINC00163-201ENST00000434081 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
LINC00163-201ENST00000434081 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
LINC00163-201ENST00000434081 KIF21BO75037 1637 aa22.83■■□□□ 1.25
LINC00163-201ENST00000434081 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
LINC00163-201ENST00000434081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.77■■□□□ 1.24
LINC00163-201ENST00000434081 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
LINC00163-201ENST00000434081 CUX1P39880 1505 aa22.74■■□□□ 1.23
LINC00163-201ENST00000434081 CCER1Q8TC90 406 aaPredicted RBP22.73■■□□□ 1.23
LINC00163-201ENST00000434081 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
LINC00163-201ENST00000434081 CLIP1P30622 1438 aa22.68■■□□□ 1.22
LINC00163-201ENST00000434081 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
LINC00163-201ENST00000434081 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
LINC00163-201ENST00000434081 VPS8Q8N3P4 1428 aa22.59■■□□□ 1.21
LINC00163-201ENST00000434081 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
LINC00163-201ENST00000434081 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
LINC00163-201ENST00000434081 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
LINC00163-201ENST00000434081 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
LINC00163-201ENST00000434081 APLP2Q06481 763 aa22.45■■□□□ 1.18
LINC00163-201ENST00000434081 FANCD2Q9BXW9 1451 aa22.44■■□□□ 1.18
LINC00163-201ENST00000434081 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
LINC00163-201ENST00000434081 CUX2O14529 1486 aa22.38■■□□□ 1.17
LINC00163-201ENST00000434081 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
LINC00163-201ENST00000434081 ARAP1Q96P48 1450 aa22.33■■□□□ 1.17
LINC00163-201ENST00000434081 IGF1RP08069 1367 aa22.31■■□□□ 1.16
LINC00163-201ENST00000434081 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
LINC00163-201ENST00000434081 NESP48681 1621 aa22.31■■□□□ 1.16
LINC00163-201ENST00000434081 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
LINC00163-201ENST00000434081 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
LINC00163-201ENST00000434081 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
LINC00163-201ENST00000434081 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
LINC00163-201ENST00000434081 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
LINC00163-201ENST00000434081 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
LINC00163-201ENST00000434081 KANK4Q5T7N3 995 aaPredicted RBP22.16■■□□□ 1.14
LINC00163-201ENST00000434081 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
LINC00163-201ENST00000434081 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
LINC00163-201ENST00000434081 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
LINC00163-201ENST00000434081 URB2Q14146 1524 aaKnown RBP22.12■■□□□ 1.13
LINC00163-201ENST00000434081 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
LINC00163-201ENST00000434081 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
LINC00163-201ENST00000434081 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
LINC00163-201ENST00000434081 CUL7Q14999 1698 aa22.03■■□□□ 1.12
LINC00163-201ENST00000434081 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
LINC00163-201ENST00000434081 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
LINC00163-201ENST00000434081 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
LINC00163-201ENST00000434081 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
LINC00163-201ENST00000434081 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.1
LINC00163-201ENST00000434081 DHX57Q6P158 1386 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms