RNA–Protein interactions for RNA: ENST00000535759.1

TPRX1-202, Transcript of tetrapeptide repeat homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPRX1, Length 2,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1-202ENST00000535759 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
TPRX1-202ENST00000535759 CCDC180Q9P1Z9 1646 aa27.58■■■□□ 2.01
TPRX1-202ENST00000535759 ZCCHC6Q5VYS8 1495 aaKnown RBP26.83■■□□□ 1.89
TPRX1-202ENST00000535759 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
TPRX1-202ENST00000535759 DCAF1Q9Y4B6 1507 aa26.3■■□□□ 1.8
TPRX1-202ENST00000535759 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
TPRX1-202ENST00000535759 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.72
TPRX1-202ENST00000535759 ABCC9O60706 1549 aa25.78■■□□□ 1.72
TPRX1-202ENST00000535759 NACADO15069 1562 aa25.59■■□□□ 1.69
TPRX1-202ENST00000535759 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
TPRX1-202ENST00000535759 SCRIBQ14160 1630 aa25.47■■□□□ 1.67
TPRX1-202ENST00000535759 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
TPRX1-202ENST00000535759 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
TPRX1-202ENST00000535759 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
TPRX1-202ENST00000535759 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
TPRX1-202ENST00000535759 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TPRX1-202ENST00000535759 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
TPRX1-202ENST00000535759 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
TPRX1-202ENST00000535759 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
TPRX1-202ENST00000535759 WIZO95785 1651 aa24.47■■□□□ 1.51
TPRX1-202ENST00000535759 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
TPRX1-202ENST00000535759 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
TPRX1-202ENST00000535759 HRCP23327 699 aa24.25■■□□□ 1.47
TPRX1-202ENST00000535759 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
TPRX1-202ENST00000535759 PEG3Q9GZU2 1588 aa24.07■■□□□ 1.44
TPRX1-202ENST00000535759 SMARCA2P51531 1590 aa24■■□□□ 1.43
TPRX1-202ENST00000535759 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
TPRX1-202ENST00000535759 PCGF6Q9BYE7 350 aa23.96■■□□□ 1.43
TPRX1-202ENST00000535759 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
TPRX1-202ENST00000535759 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
TPRX1-202ENST00000535759 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
TPRX1-202ENST00000535759 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
TPRX1-202ENST00000535759 LOC105371045A0A1W2PR82 267 aa23.71■■□□□ 1.39
TPRX1-202ENST00000535759 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
TPRX1-202ENST00000535759 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
TPRX1-202ENST00000535759 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
TPRX1-202ENST00000535759 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.36
TPRX1-202ENST00000535759 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
TPRX1-202ENST00000535759 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
TPRX1-202ENST00000535759 WRNQ14191 1432 aaPredicted RBP eCLIP23.4■■□□□ 1.34
TPRX1-202ENST00000535759 CC2D2AQ9P2K1 1620 aa23.32■■□□□ 1.32
TPRX1-202ENST00000535759 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
TPRX1-202ENST00000535759 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
TPRX1-202ENST00000535759 EEA1Q15075 1411 aa23.26■■□□□ 1.31
TPRX1-202ENST00000535759 SOGA1O94964 1423 aa23.24■■□□□ 1.31
TPRX1-202ENST00000535759 EHMT2Q96KQ7 1210 aa23.23■■□□□ 1.31
TPRX1-202ENST00000535759 CFTRP13569 1480 aa23.21■■□□□ 1.31
TPRX1-202ENST00000535759 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
TPRX1-202ENST00000535759 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
TPRX1-202ENST00000535759 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
TPRX1-202ENST00000535759 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
TPRX1-202ENST00000535759 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
TPRX1-202ENST00000535759 CADPSQ9ULU8 1353 aa23.04■■□□□ 1.28
TPRX1-202ENST00000535759 CUX1P39880 1505 aa23■■□□□ 1.27
TPRX1-202ENST00000535759 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
TPRX1-202ENST00000535759 TNIKQ9UKE5 1360 aa22.95■■□□□ 1.26
TPRX1-202ENST00000535759 KIF21BO75037 1637 aa22.95■■□□□ 1.26
TPRX1-202ENST00000535759 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
TPRX1-202ENST00000535759 CEP162Q5TB80 1403 aa22.89■■□□□ 1.26
TPRX1-202ENST00000535759 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
TPRX1-202ENST00000535759 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
TPRX1-202ENST00000535759 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
TPRX1-202ENST00000535759 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
TPRX1-202ENST00000535759 RAPGEF2Q9Y4G8 1499 aa22.75■■□□□ 1.23
TPRX1-202ENST00000535759 NESP48681 1621 aa22.75■■□□□ 1.23
TPRX1-202ENST00000535759 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
TPRX1-202ENST00000535759 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
TPRX1-202ENST00000535759 PRXQ9BXM0 1461 aa22.7■■□□□ 1.22
TPRX1-202ENST00000535759 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
TPRX1-202ENST00000535759 CUX2O14529 1486 aa22.64■■□□□ 1.21
TPRX1-202ENST00000535759 CLIP1P30622 1438 aa22.62■■□□□ 1.21
TPRX1-202ENST00000535759 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
TPRX1-202ENST00000535759 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
TPRX1-202ENST00000535759 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
TPRX1-202ENST00000535759 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
TPRX1-202ENST00000535759 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
TPRX1-202ENST00000535759 IGF1RP08069 1367 aa22.5■■□□□ 1.19
TPRX1-202ENST00000535759 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
TPRX1-202ENST00000535759 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
TPRX1-202ENST00000535759 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
TPRX1-202ENST00000535759 VPS8Q8N3P4 1428 aa22.47■■□□□ 1.19
TPRX1-202ENST00000535759 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
TPRX1-202ENST00000535759 PELP1Q8IZL8 1130 aaKnown RBP22.46■■□□□ 1.19
TPRX1-202ENST00000535759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
TPRX1-202ENST00000535759 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
TPRX1-202ENST00000535759 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
TPRX1-202ENST00000535759 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
TPRX1-202ENST00000535759 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
TPRX1-202ENST00000535759 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
TPRX1-202ENST00000535759 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
TPRX1-202ENST00000535759 CUL7Q14999 1698 aa22.32■■□□□ 1.16
TPRX1-202ENST00000535759 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
TPRX1-202ENST00000535759 APLP2Q06481 763 aa22.28■■□□□ 1.16
TPRX1-202ENST00000535759 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
TPRX1-202ENST00000535759 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.15
TPRX1-202ENST00000535759 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
TPRX1-202ENST00000535759 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
TPRX1-202ENST00000535759 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
TPRX1-202ENST00000535759 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
TPRX1-202ENST00000535759 DIEXFQ68CQ4 756 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms