RNA–Protein interactions for RNA: ENST00000374029.1

GJB1-203, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GJB1, Length 1,587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-203ENST00000374029 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
GJB1-203ENST00000374029 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
GJB1-203ENST00000374029 ABCC9O60706 1549 aa29.49■■■□□ 2.31
GJB1-203ENST00000374029 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
GJB1-203ENST00000374029 NACADO15069 1562 aa28.56■■■□□ 2.16
GJB1-203ENST00000374029 RB1CC1Q8TDY2 1594 aa28.54■■■□□ 2.16
GJB1-203ENST00000374029 MYO15BQ96JP2 1530 aa28.47■■■□□ 2.15
GJB1-203ENST00000374029 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
GJB1-203ENST00000374029 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
GJB1-203ENST00000374029 UNC13AQ9UPW8 1703 aa27.95■■■□□ 2.06
GJB1-203ENST00000374029 SCRIBQ14160 1630 aa27.76■■■□□ 2.03
GJB1-203ENST00000374029 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.02
GJB1-203ENST00000374029 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 2
GJB1-203ENST00000374029 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
GJB1-203ENST00000374029 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
GJB1-203ENST00000374029 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
GJB1-203ENST00000374029 CC2D2AQ9P2K1 1620 aa26.73■■□□□ 1.87
GJB1-203ENST00000374029 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.86
GJB1-203ENST00000374029 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
GJB1-203ENST00000374029 BAZ1AQ9NRL2 1556 aaPredicted RBP26.59■■□□□ 1.85
GJB1-203ENST00000374029 MROH2BQ7Z745 1585 aa26.4■■□□□ 1.82
GJB1-203ENST00000374029 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
GJB1-203ENST00000374029 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
GJB1-203ENST00000374029 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
GJB1-203ENST00000374029 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
GJB1-203ENST00000374029 HMGXB3Q12766 1538 aa26.25■■□□□ 1.79
GJB1-203ENST00000374029 WIZO95785 1651 aa26.17■■□□□ 1.78
GJB1-203ENST00000374029 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
GJB1-203ENST00000374029 RSF1Q96T23 1441 aaPredicted RBP26.16■■□□□ 1.78
GJB1-203ENST00000374029 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
GJB1-203ENST00000374029 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
GJB1-203ENST00000374029 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
GJB1-203ENST00000374029 NESP48681 1621 aa25.58■■□□□ 1.69
GJB1-203ENST00000374029 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
GJB1-203ENST00000374029 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
GJB1-203ENST00000374029 CFTRP13569 1480 aa25.44■■□□□ 1.66
GJB1-203ENST00000374029 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
GJB1-203ENST00000374029 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
GJB1-203ENST00000374029 PDS5BQ9NTI5 1447 aa25.4■■□□□ 1.66
GJB1-203ENST00000374029 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
GJB1-203ENST00000374029 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
GJB1-203ENST00000374029 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
GJB1-203ENST00000374029 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
GJB1-203ENST00000374029 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.61
GJB1-203ENST00000374029 CUX2O14529 1486 aa25.11■■□□□ 1.61
GJB1-203ENST00000374029 WDR62O43379 1518 aa25.07■■□□□ 1.6
GJB1-203ENST00000374029 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
GJB1-203ENST00000374029 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
GJB1-203ENST00000374029 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
GJB1-203ENST00000374029 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
GJB1-203ENST00000374029 CUX1P39880 1505 aa24.77■■□□□ 1.56
GJB1-203ENST00000374029 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
GJB1-203ENST00000374029 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
GJB1-203ENST00000374029 POLA1P09884 1462 aaPredicted RBP24.68■■□□□ 1.54
GJB1-203ENST00000374029 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
GJB1-203ENST00000374029 FGD5Q6ZNL6 1462 aa24.66■■□□□ 1.54
GJB1-203ENST00000374029 TOP2BQ02880 1626 aa24.66■■□□□ 1.54
GJB1-203ENST00000374029 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
GJB1-203ENST00000374029 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
GJB1-203ENST00000374029 SOGA1O94964 1423 aa24.56■■□□□ 1.52
GJB1-203ENST00000374029 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
GJB1-203ENST00000374029 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
GJB1-203ENST00000374029 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
GJB1-203ENST00000374029 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
GJB1-203ENST00000374029 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
GJB1-203ENST00000374029 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.49
GJB1-203ENST00000374029 TDRD9Q8NDG6 1382 aaKnown RBP24.37■■□□□ 1.49
GJB1-203ENST00000374029 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
GJB1-203ENST00000374029 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
GJB1-203ENST00000374029 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
GJB1-203ENST00000374029 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
GJB1-203ENST00000374029 MAGI1Q96QZ7 1491 aaPredicted RBP24.21■■□□□ 1.47
GJB1-203ENST00000374029 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.47
GJB1-203ENST00000374029 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
GJB1-203ENST00000374029 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
GJB1-203ENST00000374029 CHD1O14646 1710 aa24.17■■□□□ 1.46
GJB1-203ENST00000374029 KIF27Q86VH2 1401 aa24.16■■□□□ 1.46
GJB1-203ENST00000374029 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
GJB1-203ENST00000374029 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
GJB1-203ENST00000374029 CUL7Q14999 1698 aa24.04■■□□□ 1.44
GJB1-203ENST00000374029 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
GJB1-203ENST00000374029 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
GJB1-203ENST00000374029 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
GJB1-203ENST00000374029 FBLN2P98095 1184 aa24.02■■□□□ 1.44
GJB1-203ENST00000374029 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
GJB1-203ENST00000374029 IGF1RP08069 1367 aa23.99■■□□□ 1.43
GJB1-203ENST00000374029 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
GJB1-203ENST00000374029 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
GJB1-203ENST00000374029 RUSC2Q8N2Y8 1516 aa23.96■■□□□ 1.43
GJB1-203ENST00000374029 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
GJB1-203ENST00000374029 EEA1Q15075 1411 aa23.87■■□□□ 1.41
GJB1-203ENST00000374029 CARMIL1Q5VZK9 1371 aa23.86■■□□□ 1.41
GJB1-203ENST00000374029 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
GJB1-203ENST00000374029 NUP160Q12769 1436 aa23.84■■□□□ 1.41
GJB1-203ENST00000374029 RAPGEF2Q9Y4G8 1499 aa23.78■■□□□ 1.4
GJB1-203ENST00000374029 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
GJB1-203ENST00000374029 CSRNP3Q8WYN3 585 aa23.72■■□□□ 1.39
GJB1-203ENST00000374029 RIMBP3CA6NJZ7 1639 aa23.7■■□□□ 1.38
GJB1-203ENST00000374029 RIMBP3BA6NNM3 1639 aa23.7■■□□□ 1.38
GJB1-203ENST00000374029 RIMBP3Q9UFD9 1639 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms