Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.18■■■■□ 3.38
SHKBP1Q8TBC3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.47■■■■□ 3.27
SHKBP1Q8TBC3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
SHKBP1Q8TBC3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
SHKBP1Q8TBC3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
SHKBP1Q8TBC3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.91■■■■□ 3.18
SHKBP1Q8TBC3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
SHKBP1Q8TBC3 AL356512.1-201ENST00000607453 1739 ntBASIC34.72■■■■□ 3.15
SHKBP1Q8TBC3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.03■■■■□ 3.04
SHKBP1Q8TBC3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.87■■■■□ 3.01
SHKBP1Q8TBC3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.86■■■■□ 3.01
SHKBP1Q8TBC3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.82■■■■□ 3
SHKBP1Q8TBC3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.8■■■■□ 3
SHKBP1Q8TBC3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.74■■■□□ 2.99
SHKBP1Q8TBC3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.67■■■□□ 2.98
SHKBP1Q8TBC3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.53■■■□□ 2.96
SHKBP1Q8TBC3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.48■■■□□ 2.95
SHKBP1Q8TBC3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
SHKBP1Q8TBC3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.43■■■□□ 2.94
SHKBP1Q8TBC3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SHKBP1Q8TBC3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SHKBP1Q8TBC3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.21■■■□□ 2.91
SHKBP1Q8TBC3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
SHKBP1Q8TBC3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
SHKBP1Q8TBC3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
SHKBP1Q8TBC3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SHKBP1Q8TBC3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.84■■■□□ 2.85
SHKBP1Q8TBC3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SHKBP1Q8TBC3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
SHKBP1Q8TBC3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.7■■■□□ 2.83
SHKBP1Q8TBC3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
SHKBP1Q8TBC3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SHKBP1Q8TBC3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SHKBP1Q8TBC3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.43■■■□□ 2.78
SHKBP1Q8TBC3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
SHKBP1Q8TBC3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SHKBP1Q8TBC3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.24■■■□□ 2.75
SHKBP1Q8TBC3 AC015813.7-201ENST00000623294 581 ntBASIC32.23■■■□□ 2.75
SHKBP1Q8TBC3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.21■■■□□ 2.75
SHKBP1Q8TBC3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
SHKBP1Q8TBC3 AC006077.2-201ENST00000623591 457 ntBASIC32.16■■■□□ 2.74
SHKBP1Q8TBC3 ZNRF2P1-201ENST00000441407 443 ntBASIC32.11■■■□□ 2.73
SHKBP1Q8TBC3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.1■■■□□ 2.73
SHKBP1Q8TBC3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SHKBP1Q8TBC3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
SHKBP1Q8TBC3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
SHKBP1Q8TBC3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SHKBP1Q8TBC3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SHKBP1Q8TBC3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SHKBP1Q8TBC3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SHKBP1Q8TBC3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SHKBP1Q8TBC3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.67■■■□□ 2.66
SHKBP1Q8TBC3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
SHKBP1Q8TBC3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SHKBP1Q8TBC3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SHKBP1Q8TBC3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.4■■■□□ 2.62
SHKBP1Q8TBC3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.4■■■□□ 2.62
SHKBP1Q8TBC3 AP002365.1-201ENST00000603448 772 ntBASIC31.34■■■□□ 2.61
SHKBP1Q8TBC3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
SHKBP1Q8TBC3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.29■■■□□ 2.6
SHKBP1Q8TBC3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.28■■■□□ 2.6
SHKBP1Q8TBC3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SHKBP1Q8TBC3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHKBP1Q8TBC3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHKBP1Q8TBC3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHKBP1Q8TBC3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
SHKBP1Q8TBC3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
SHKBP1Q8TBC3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.18■■■□□ 2.58
SHKBP1Q8TBC3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SHKBP1Q8TBC3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.17■■■□□ 2.58
SHKBP1Q8TBC3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SHKBP1Q8TBC3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SHKBP1Q8TBC3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.15■■■□□ 2.58
SHKBP1Q8TBC3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
SHKBP1Q8TBC3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SHKBP1Q8TBC3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.1■■■□□ 2.57
SHKBP1Q8TBC3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.09■■■□□ 2.57
SHKBP1Q8TBC3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.06■■■□□ 2.56
SHKBP1Q8TBC3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SHKBP1Q8TBC3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
SHKBP1Q8TBC3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
SHKBP1Q8TBC3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.02■■■□□ 2.56
SHKBP1Q8TBC3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
SHKBP1Q8TBC3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SHKBP1Q8TBC3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.94■■■□□ 2.54
SHKBP1Q8TBC3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.94■■■□□ 2.54
SHKBP1Q8TBC3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SHKBP1Q8TBC3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
SHKBP1Q8TBC3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHKBP1Q8TBC3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SHKBP1Q8TBC3 DYNLL1-208ENST00000550178 581 ntBASIC30.84■■■□□ 2.53
SHKBP1Q8TBC3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
SHKBP1Q8TBC3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.83■■■□□ 2.53
SHKBP1Q8TBC3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
SHKBP1Q8TBC3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
SHKBP1Q8TBC3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.75■■■□□ 2.51
SHKBP1Q8TBC3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHKBP1Q8TBC3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SHKBP1Q8TBC3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SHKBP1Q8TBC3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms