RNA–Protein interactions for RNA: ENST00000301407.7

CGB1-201, Transcript of chorionic gonadotropin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGB1, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1-201ENST00000301407 NISCHQ9Y2I1 1504 aa34.4■■■■□ 3.1
CGB1-201ENST00000301407 ABCC9O60706 1549 aa30.62■■■□□ 2.49
CGB1-201ENST00000301407 CCDC180Q9P1Z9 1646 aa30.61■■■□□ 2.49
CGB1-201ENST00000301407 DCAF8L2P0C7V8 631 aa29.21■■■□□ 2.27
CGB1-201ENST00000301407 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
CGB1-201ENST00000301407 NACADO15069 1562 aa28.94■■■□□ 2.22
CGB1-201ENST00000301407 PABPN1Q86U42 306 aaKnown RBP eCLIP28.65■■■□□ 2.18
CGB1-201ENST00000301407 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
CGB1-201ENST00000301407 MYO15BQ96JP2 1530 aa28.55■■■□□ 2.16
CGB1-201ENST00000301407 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
CGB1-201ENST00000301407 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
CGB1-201ENST00000301407 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
CGB1-201ENST00000301407 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
CGB1-201ENST00000301407 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
CGB1-201ENST00000301407 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.03
CGB1-201ENST00000301407 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
CGB1-201ENST00000301407 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
CGB1-201ENST00000301407 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
CGB1-201ENST00000301407 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
CGB1-201ENST00000301407 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
CGB1-201ENST00000301407 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
CGB1-201ENST00000301407 BAZ1AQ9NRL2 1556 aaPredicted RBP26.64■■□□□ 1.86
CGB1-201ENST00000301407 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
CGB1-201ENST00000301407 MROH2BQ7Z745 1585 aa26.57■■□□□ 1.84
CGB1-201ENST00000301407 HMGXB3Q12766 1538 aa26.53■■□□□ 1.84
CGB1-201ENST00000301407 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
CGB1-201ENST00000301407 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
CGB1-201ENST00000301407 NESP48681 1621 aa26.38■■□□□ 1.81
CGB1-201ENST00000301407 ERCC6Q03468 1493 aa26.37■■□□□ 1.81
CGB1-201ENST00000301407 WIZO95785 1651 aa26.25■■□□□ 1.79
CGB1-201ENST00000301407 CUX2O14529 1486 aa26.12■■□□□ 1.77
CGB1-201ENST00000301407 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
CGB1-201ENST00000301407 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
CGB1-201ENST00000301407 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
CGB1-201ENST00000301407 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
CGB1-201ENST00000301407 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
CGB1-201ENST00000301407 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
CGB1-201ENST00000301407 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
CGB1-201ENST00000301407 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
CGB1-201ENST00000301407 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
CGB1-201ENST00000301407 CFTRP13569 1480 aa25.73■■□□□ 1.71
CGB1-201ENST00000301407 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
CGB1-201ENST00000301407 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
CGB1-201ENST00000301407 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
CGB1-201ENST00000301407 WDR62O43379 1518 aa25.62■■□□□ 1.69
CGB1-201ENST00000301407 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
CGB1-201ENST00000301407 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
CGB1-201ENST00000301407 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
CGB1-201ENST00000301407 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
CGB1-201ENST00000301407 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
CGB1-201ENST00000301407 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
CGB1-201ENST00000301407 ABCC8Q09428 1581 aa25.14■■□□□ 1.61
CGB1-201ENST00000301407 OSCARQ8IYS5 282 aa25.13■■□□□ 1.61
CGB1-201ENST00000301407 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
CGB1-201ENST00000301407 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
CGB1-201ENST00000301407 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.6
CGB1-201ENST00000301407 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
CGB1-201ENST00000301407 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
CGB1-201ENST00000301407 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
CGB1-201ENST00000301407 SOGA1O94964 1423 aa24.95■■□□□ 1.59
CGB1-201ENST00000301407 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
CGB1-201ENST00000301407 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
CGB1-201ENST00000301407 CUX1P39880 1505 aa24.93■■□□□ 1.58
CGB1-201ENST00000301407 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
CGB1-201ENST00000301407 FBLN2P98095 1184 aa24.89■■□□□ 1.58
CGB1-201ENST00000301407 CHD1O14646 1710 aa24.72■■□□□ 1.55
CGB1-201ENST00000301407 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.55
CGB1-201ENST00000301407 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
CGB1-201ENST00000301407 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
CGB1-201ENST00000301407 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
CGB1-201ENST00000301407 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
CGB1-201ENST00000301407 GRIN2BQ13224 1484 aa24.64■■□□□ 1.54
CGB1-201ENST00000301407 ARHGEF11O15085 1522 aa24.64■■□□□ 1.53
CGB1-201ENST00000301407 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
CGB1-201ENST00000301407 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
CGB1-201ENST00000301407 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
CGB1-201ENST00000301407 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
CGB1-201ENST00000301407 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
CGB1-201ENST00000301407 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
CGB1-201ENST00000301407 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
CGB1-201ENST00000301407 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
CGB1-201ENST00000301407 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
CGB1-201ENST00000301407 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
CGB1-201ENST00000301407 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
CGB1-201ENST00000301407 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
CGB1-201ENST00000301407 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
CGB1-201ENST00000301407 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
CGB1-201ENST00000301407 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
CGB1-201ENST00000301407 ADAMTS12P58397 1594 aa24.31■■□□□ 1.48
CGB1-201ENST00000301407 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
CGB1-201ENST00000301407 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
CGB1-201ENST00000301407 TRHP20396 242 aaPredicted RBP24.25■■□□□ 1.47
CGB1-201ENST00000301407 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
CGB1-201ENST00000301407 NUP160Q12769 1436 aa24.22■■□□□ 1.47
CGB1-201ENST00000301407 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
CGB1-201ENST00000301407 IGF1RP08069 1367 aa24.14■■□□□ 1.45
CGB1-201ENST00000301407 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
CGB1-201ENST00000301407 JPH4Q96JJ6 628 aa24.1■■□□□ 1.45
CGB1-201ENST00000301407 PRG4Q92954 1404 aaPredicted RBP24.05■■□□□ 1.44
CGB1-201ENST00000301407 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms