RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NISCHQ9Y2I1 1504 aa34.3■■■■□ 3.08
HLA-DQB1-202ENST00000399079 CCDC180Q9P1Z9 1646 aa30.44■■■□□ 2.46
HLA-DQB1-202ENST00000399079 ABCC9O60706 1549 aa29.99■■■□□ 2.39
HLA-DQB1-202ENST00000399079 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
HLA-DQB1-202ENST00000399079 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
HLA-DQB1-202ENST00000399079 NACADO15069 1562 aa28.67■■■□□ 2.18
HLA-DQB1-202ENST00000399079 ZCCHC6Q5VYS8 1495 aaKnown RBP28.55■■■□□ 2.16
HLA-DQB1-202ENST00000399079 MYO15BQ96JP2 1530 aa28.45■■■□□ 2.14
HLA-DQB1-202ENST00000399079 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
HLA-DQB1-202ENST00000399079 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
HLA-DQB1-202ENST00000399079 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
HLA-DQB1-202ENST00000399079 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
HLA-DQB1-202ENST00000399079 SCRIBQ14160 1630 aa27.87■■■□□ 2.05
HLA-DQB1-202ENST00000399079 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
HLA-DQB1-202ENST00000399079 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
HLA-DQB1-202ENST00000399079 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
HLA-DQB1-202ENST00000399079 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
HLA-DQB1-202ENST00000399079 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
HLA-DQB1-202ENST00000399079 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
HLA-DQB1-202ENST00000399079 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
HLA-DQB1-202ENST00000399079 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
HLA-DQB1-202ENST00000399079 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
HLA-DQB1-202ENST00000399079 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
HLA-DQB1-202ENST00000399079 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
HLA-DQB1-202ENST00000399079 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.81
HLA-DQB1-202ENST00000399079 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
HLA-DQB1-202ENST00000399079 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
HLA-DQB1-202ENST00000399079 WIZO95785 1651 aa26.18■■□□□ 1.78
HLA-DQB1-202ENST00000399079 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
HLA-DQB1-202ENST00000399079 NESP48681 1621 aa25.94■■□□□ 1.74
HLA-DQB1-202ENST00000399079 TOP2AP11388 1531 aaKnown RBP25.85■■□□□ 1.73
HLA-DQB1-202ENST00000399079 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
HLA-DQB1-202ENST00000399079 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
HLA-DQB1-202ENST00000399079 CADPSQ9ULU8 1353 aa25.74■■□□□ 1.71
HLA-DQB1-202ENST00000399079 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
HLA-DQB1-202ENST00000399079 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
HLA-DQB1-202ENST00000399079 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
HLA-DQB1-202ENST00000399079 CFTRP13569 1480 aa25.56■■□□□ 1.68
HLA-DQB1-202ENST00000399079 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
HLA-DQB1-202ENST00000399079 CUX2O14529 1486 aa25.51■■□□□ 1.67
HLA-DQB1-202ENST00000399079 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
HLA-DQB1-202ENST00000399079 FANCD2Q9BXW9 1451 aa25.45■■□□□ 1.66
HLA-DQB1-202ENST00000399079 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
HLA-DQB1-202ENST00000399079 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
HLA-DQB1-202ENST00000399079 WDR62O43379 1518 aa25.28■■□□□ 1.64
HLA-DQB1-202ENST00000399079 PRDM2Q13029 1718 aa25.27■■□□□ 1.64
HLA-DQB1-202ENST00000399079 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
HLA-DQB1-202ENST00000399079 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
HLA-DQB1-202ENST00000399079 ABCC8Q09428 1581 aa24.95■■□□□ 1.59
HLA-DQB1-202ENST00000399079 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.59
HLA-DQB1-202ENST00000399079 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
HLA-DQB1-202ENST00000399079 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
HLA-DQB1-202ENST00000399079 CUX1P39880 1505 aa24.82■■□□□ 1.56
HLA-DQB1-202ENST00000399079 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
HLA-DQB1-202ENST00000399079 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
HLA-DQB1-202ENST00000399079 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
HLA-DQB1-202ENST00000399079 FGD5Q6ZNL6 1462 aa24.75■■□□□ 1.55
HLA-DQB1-202ENST00000399079 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
HLA-DQB1-202ENST00000399079 SOGA1O94964 1423 aa24.72■■□□□ 1.55
HLA-DQB1-202ENST00000399079 AQRO60306 1485 aaKnown RBP eCLIP24.68■■□□□ 1.54
HLA-DQB1-202ENST00000399079 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
HLA-DQB1-202ENST00000399079 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
HLA-DQB1-202ENST00000399079 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
HLA-DQB1-202ENST00000399079 SYNJ1O43426 1573 aa24.58■■□□□ 1.53
HLA-DQB1-202ENST00000399079 TOP2BQ02880 1626 aa24.56■■□□□ 1.52
HLA-DQB1-202ENST00000399079 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
HLA-DQB1-202ENST00000399079 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
HLA-DQB1-202ENST00000399079 WDR97A6NE52 1622 aa24.49■■□□□ 1.51
HLA-DQB1-202ENST00000399079 ABCA10Q8WWZ4 1543 aa24.48■■□□□ 1.51
HLA-DQB1-202ENST00000399079 FBLN2P98095 1184 aa24.42■■□□□ 1.5
HLA-DQB1-202ENST00000399079 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
HLA-DQB1-202ENST00000399079 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
HLA-DQB1-202ENST00000399079 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
HLA-DQB1-202ENST00000399079 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
HLA-DQB1-202ENST00000399079 CHD1O14646 1710 aa24.35■■□□□ 1.49
HLA-DQB1-202ENST00000399079 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
HLA-DQB1-202ENST00000399079 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
HLA-DQB1-202ENST00000399079 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
HLA-DQB1-202ENST00000399079 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
HLA-DQB1-202ENST00000399079 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.47
HLA-DQB1-202ENST00000399079 ERICH3Q5RHP9 1530 aa24.17■■□□□ 1.46
HLA-DQB1-202ENST00000399079 ADAMTS12P58397 1594 aa24.15■■□□□ 1.46
HLA-DQB1-202ENST00000399079 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
HLA-DQB1-202ENST00000399079 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
HLA-DQB1-202ENST00000399079 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
HLA-DQB1-202ENST00000399079 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
HLA-DQB1-202ENST00000399079 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
HLA-DQB1-202ENST00000399079 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
HLA-DQB1-202ENST00000399079 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
HLA-DQB1-202ENST00000399079 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
HLA-DQB1-202ENST00000399079 CLASP1Q7Z460 1538 aa24.09■■□□□ 1.45
HLA-DQB1-202ENST00000399079 IGF1RP08069 1367 aa24.07■■□□□ 1.44
HLA-DQB1-202ENST00000399079 CEP170Q5SW79 1584 aa24■■□□□ 1.43
HLA-DQB1-202ENST00000399079 NUP160Q12769 1436 aa24■■□□□ 1.43
HLA-DQB1-202ENST00000399079 RUSC2Q8N2Y8 1516 aa23.96■■□□□ 1.43
HLA-DQB1-202ENST00000399079 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
HLA-DQB1-202ENST00000399079 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
HLA-DQB1-202ENST00000399079 CUL7Q14999 1698 aa23.91■■□□□ 1.42
HLA-DQB1-202ENST00000399079 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
HLA-DQB1-202ENST00000399079 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms