Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC067942.1-202ENST00000471756 1057 ntBASIC8.55□□□□□ -1.04
APOBP04114 FPGT-205ENST00000482102 561 ntTSL 4 BASIC8.55□□□□□ -1.04
APOBP04114 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
APOBP04114 FTH1-205ENST00000529631 507 ntTSL 4 BASIC8.55□□□□□ -1.04
APOBP04114 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC8.55□□□□□ -1.04
APOBP04114 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
APOBP04114 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
APOBP04114 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC8.55□□□□□ -1.04
APOBP04114 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC8.55□□□□□ -1.04
APOBP04114 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
APOBP04114 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC8.55□□□□□ -1.04
APOBP04114 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC8.55□□□□□ -1.04
APOBP04114 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC8.55□□□□□ -1.04
APOBP04114 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
APOBP04114 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 MKL1-204ENST00000402630 747 ntTSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 AL161727.1-201ENST00000457409 530 ntBASIC8.54□□□□□ -1.04
APOBP04114 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 MED11-203ENST00000575284 652 ntTSL 3 BASIC8.54□□□□□ -1.04
APOBP04114 MIR6871-201ENST00000613433 56 ntBASIC8.54□□□□□ -1.04
APOBP04114 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC8.54□□□□□ -1.04
APOBP04114 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC8.54□□□□□ -1.04
APOBP04114 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 PMM2-216ENST00000569958 698 ntTSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 DUX4L33-201ENST00000635217 958 ntBASIC8.54□□□□□ -1.04
APOBP04114 AP000437.1-201ENST00000624057 2085 ntBASIC8.54□□□□□ -1.04
APOBP04114 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC8.54□□□□□ -1.04
APOBP04114 RN7SL2-201ENST00000490232 300 ntBASIC8.54□□□□□ -1.04
APOBP04114 IGHV7-56-201ENST00000518372 351 ntBASIC8.54□□□□□ -1.04
APOBP04114 KRT127P-201ENST00000547183 433 ntBASIC8.54□□□□□ -1.04
APOBP04114 RN7SL4P-201ENST00000584058 295 ntBASIC8.54□□□□□ -1.04
APOBP04114 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC8.54□□□□□ -1.04
APOBP04114 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 AC040160.2-201ENST00000623816 1675 ntBASIC8.54□□□□□ -1.04
APOBP04114 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 AL031587.5-201ENST00000624344 1849 ntBASIC8.54□□□□□ -1.04
APOBP04114 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
APOBP04114 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
APOBP04114 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC8.54□□□□□ -1.04
APOBP04114 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC8.54□□□□□ -1.04
APOBP04114 RPL13AP5-201ENST00000439189 612 ntBASIC8.54□□□□□ -1.04
APOBP04114 RPL35P1-201ENST00000450819 370 ntBASIC8.54□□□□□ -1.04
APOBP04114 RN7SL479P-201ENST00000472003 300 ntBASIC8.54□□□□□ -1.04
APOBP04114 RN7SL646P-201ENST00000492969 297 ntBASIC8.54□□□□□ -1.04
APOBP04114 AC092284.1-201ENST00000511386 1289 ntBASIC8.54□□□□□ -1.04
APOBP04114 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC8.54□□□□□ -1.04
APOBP04114 AC091736.1-201ENST00000609370 305 ntBASIC8.54□□□□□ -1.04
APOBP04114 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 CICP14-201ENST00000629111 2732 ntBASIC8.54□□□□□ -1.04
APOBP04114 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
APOBP04114 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms