RNA–Protein interactions for RNA: ENST00000421064.5

AP000347.2-202, humanhuman

TSL 1 (best) BASIC

Gene AP000347.2, Length 3,041 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000347.2-202ENST00000421064 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
AP000347.2-202ENST00000421064 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.16
AP000347.2-202ENST00000421064 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
AP000347.2-202ENST00000421064 HRCP23327 699 aa28.35■■■□□ 2.13
AP000347.2-202ENST00000421064 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
AP000347.2-202ENST00000421064 PCGF6Q9BYE7 350 aa27.9■■■□□ 2.06
AP000347.2-202ENST00000421064 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
AP000347.2-202ENST00000421064 PPARGC1BQ86YN6 1023 aaKnown RBP27.77■■■□□ 2.04
AP000347.2-202ENST00000421064 ZCCHC6Q5VYS8 1495 aaKnown RBP27.5■■□□□ 1.99
AP000347.2-202ENST00000421064 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
AP000347.2-202ENST00000421064 LOC105371045A0A1W2PR82 267 aa27.17■■□□□ 1.94
AP000347.2-202ENST00000421064 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
AP000347.2-202ENST00000421064 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
AP000347.2-202ENST00000421064 PELP1Q8IZL8 1130 aaKnown RBP27.01■■□□□ 1.91
AP000347.2-202ENST00000421064 CCDC180Q9P1Z9 1646 aa26.98■■□□□ 1.91
AP000347.2-202ENST00000421064 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
AP000347.2-202ENST00000421064 SCAF1Q9H7N4 1312 aaKnown RBP26.7■■□□□ 1.86
AP000347.2-202ENST00000421064 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
AP000347.2-202ENST00000421064 FAM9AQ8IZU1 332 aaPredicted RBP26.22■■□□□ 1.79
AP000347.2-202ENST00000421064 ACIN1Q9UKV3 1341 aaKnown RBP26.12■■□□□ 1.77
AP000347.2-202ENST00000421064 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
AP000347.2-202ENST00000421064 ABCC9O60706 1549 aa26.09■■□□□ 1.77
AP000347.2-202ENST00000421064 NEUROD1Q13562 356 aa26.06■■□□□ 1.76
AP000347.2-202ENST00000421064 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
AP000347.2-202ENST00000421064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.93■■□□□ 1.74
AP000347.2-202ENST00000421064 GTF3C3Q9Y5Q9 886 aa25.9■■□□□ 1.74
AP000347.2-202ENST00000421064 CCER1Q8TC90 406 aaPredicted RBP25.89■■□□□ 1.74
AP000347.2-202ENST00000421064 MYT1Q01538 1121 aa25.89■■□□□ 1.73
AP000347.2-202ENST00000421064 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
AP000347.2-202ENST00000421064 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
AP000347.2-202ENST00000421064 DIEXFQ68CQ4 756 aaKnown RBP25.81■■□□□ 1.72
AP000347.2-202ENST00000421064 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
AP000347.2-202ENST00000421064 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
AP000347.2-202ENST00000421064 ZNF316A6NFI3 1004 aaPredicted RBP25.37■■□□□ 1.65
AP000347.2-202ENST00000421064 YTHDC1Q96MU7 727 aaKnown RBP25.37■■□□□ 1.65
AP000347.2-202ENST00000421064 CECR2Q9BXF3 1484 aa25.33■■□□□ 1.65
AP000347.2-202ENST00000421064 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
AP000347.2-202ENST00000421064 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
AP000347.2-202ENST00000421064 WIZO95785 1651 aa25.2■■□□□ 1.62
AP000347.2-202ENST00000421064 MIER1Q8N108 512 aa25.17■■□□□ 1.62
AP000347.2-202ENST00000421064 CEP162Q5TB80 1403 aa25.15■■□□□ 1.62
AP000347.2-202ENST00000421064 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
AP000347.2-202ENST00000421064 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
AP000347.2-202ENST00000421064 TNIKQ9UKE5 1360 aa25.01■■□□□ 1.59
AP000347.2-202ENST00000421064 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
AP000347.2-202ENST00000421064 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
AP000347.2-202ENST00000421064 UBTFP17480 764 aaKnown RBP24.94■■□□□ 1.58
AP000347.2-202ENST00000421064 SOGA1O94964 1423 aa24.93■■□□□ 1.58
AP000347.2-202ENST00000421064 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
AP000347.2-202ENST00000421064 CSRNP3Q8WYN3 585 aa24.86■■□□□ 1.57
AP000347.2-202ENST00000421064 NACADO15069 1562 aa24.83■■□□□ 1.57
AP000347.2-202ENST00000421064 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
AP000347.2-202ENST00000421064 EEA1Q15075 1411 aa24.75■■□□□ 1.55
AP000347.2-202ENST00000421064 GOLGA3Q08378 1498 aa24.71■■□□□ 1.55
AP000347.2-202ENST00000421064 SUPT16HQ9Y5B9 1047 aaKnown RBP24.7■■□□□ 1.55
AP000347.2-202ENST00000421064 TOP2AP11388 1531 aaKnown RBP24.7■■□□□ 1.55
AP000347.2-202ENST00000421064 CLSPNQ9HAW4 1339 aa24.66■■□□□ 1.54
AP000347.2-202ENST00000421064 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
AP000347.2-202ENST00000421064 APLP2Q06481 763 aa24.54■■□□□ 1.52
AP000347.2-202ENST00000421064 TSHZ2Q9NRE2 1034 aa24.54■■□□□ 1.52
AP000347.2-202ENST00000421064 CLIP1P30622 1438 aa24.51■■□□□ 1.51
AP000347.2-202ENST00000421064 ANP32EQ9BTT0 268 aa24.49■■□□□ 1.51
AP000347.2-202ENST00000421064 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
AP000347.2-202ENST00000421064 VPS8Q8N3P4 1428 aa24.47■■□□□ 1.51
AP000347.2-202ENST00000421064 CEP164Q9UPV0 1460 aa24.47■■□□□ 1.51
AP000347.2-202ENST00000421064 RANGAP1P46060 587 aaPredicted RBP24.39■■□□□ 1.49
AP000347.2-202ENST00000421064 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
AP000347.2-202ENST00000421064 KIF21BO75037 1637 aa24.37■■□□□ 1.49
AP000347.2-202ENST00000421064 BCL11AQ9H165 835 aa24.25■■□□□ 1.47
AP000347.2-202ENST00000421064 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
AP000347.2-202ENST00000421064 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
AP000347.2-202ENST00000421064 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
AP000347.2-202ENST00000421064 BCANQ96GW7 911 aa24.22■■□□□ 1.47
AP000347.2-202ENST00000421064 KCNH8Q96L42 1107 aa24.22■■□□□ 1.47
AP000347.2-202ENST00000421064 FKBP8Q14318 412 aa24.13■■□□□ 1.45
AP000347.2-202ENST00000421064 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
AP000347.2-202ENST00000421064 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
AP000347.2-202ENST00000421064 RRBP1Q9P2E9 1410 aaKnown RBP23.99■■□□□ 1.43
AP000347.2-202ENST00000421064 ITGAEP38570 1179 aa23.98■■□□□ 1.43
AP000347.2-202ENST00000421064 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
AP000347.2-202ENST00000421064 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
AP000347.2-202ENST00000421064 DDX10Q13206 875 aaKnown RBP23.95■■□□□ 1.42
AP000347.2-202ENST00000421064 CUX2O14529 1486 aa23.94■■□□□ 1.42
AP000347.2-202ENST00000421064 NEFLP07196 543 aa23.94■■□□□ 1.42
AP000347.2-202ENST00000421064 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
AP000347.2-202ENST00000421064 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
AP000347.2-202ENST00000421064 PEG3Q9GZU2 1588 aa23.85■■□□□ 1.41
AP000347.2-202ENST00000421064 RAB3GAP2Q9H2M9 1393 aa23.84■■□□□ 1.41
AP000347.2-202ENST00000421064 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
AP000347.2-202ENST00000421064 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
AP000347.2-202ENST00000421064 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
AP000347.2-202ENST00000421064 MAPKBP1O60336 1514 aa23.82■■□□□ 1.4
AP000347.2-202ENST00000421064 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
AP000347.2-202ENST00000421064 PPP1R15AO75807 674 aaPredicted RBP23.78■■□□□ 1.4
AP000347.2-202ENST00000421064 SIN3AQ96ST3 1273 aa23.76■■□□□ 1.39
AP000347.2-202ENST00000421064 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
AP000347.2-202ENST00000421064 MSH5O43196 834 aa23.74■■□□□ 1.39
AP000347.2-202ENST00000421064 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
AP000347.2-202ENST00000421064 CCER2I3L3R5 266 aa23.72■■□□□ 1.39
AP000347.2-202ENST00000421064 ANP32CO43423 234 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms