RNA–Protein interactions for RNA: ENST00000615982.4

JRK-211, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-211ENST00000615982 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
JRK-211ENST00000615982 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
JRK-211ENST00000615982 HRCP23327 699 aa28.43■■■□□ 2.14
JRK-211ENST00000615982 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
JRK-211ENST00000615982 PELP1Q8IZL8 1130 aaKnown RBP28.17■■■□□ 2.1
JRK-211ENST00000615982 PPARGC1BQ86YN6 1023 aaKnown RBP28.04■■■□□ 2.08
JRK-211ENST00000615982 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
JRK-211ENST00000615982 PCGF6Q9BYE7 350 aa27.68■■■□□ 2.02
JRK-211ENST00000615982 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
JRK-211ENST00000615982 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
JRK-211ENST00000615982 SCAF1Q9H7N4 1312 aaKnown RBP27.34■■□□□ 1.97
JRK-211ENST00000615982 DCAF1Q9Y4B6 1507 aa27.18■■□□□ 1.94
JRK-211ENST00000615982 MYT1Q01538 1121 aa27.18■■□□□ 1.94
JRK-211ENST00000615982 MYO15BQ96JP2 1530 aa27.1■■□□□ 1.93
JRK-211ENST00000615982 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
JRK-211ENST00000615982 ABCC9O60706 1549 aa26.49■■□□□ 1.83
JRK-211ENST00000615982 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
JRK-211ENST00000615982 NACADO15069 1562 aa26.42■■□□□ 1.82
JRK-211ENST00000615982 ACIN1Q9UKV3 1341 aaKnown RBP26.4■■□□□ 1.82
JRK-211ENST00000615982 NEUROD1Q13562 356 aa26.38■■□□□ 1.81
JRK-211ENST00000615982 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
JRK-211ENST00000615982 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
JRK-211ENST00000615982 GTF3C3Q9Y5Q9 886 aa26.3■■□□□ 1.8
JRK-211ENST00000615982 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
JRK-211ENST00000615982 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
JRK-211ENST00000615982 CENPBP07199 599 aaPredicted RBP25.91■■□□□ 1.74
JRK-211ENST00000615982 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
JRK-211ENST00000615982 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
JRK-211ENST00000615982 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
JRK-211ENST00000615982 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
JRK-211ENST00000615982 BCL11AQ9H165 835 aa25.67■■□□□ 1.7
JRK-211ENST00000615982 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.69
JRK-211ENST00000615982 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
JRK-211ENST00000615982 TTBK1Q5TCY1 1321 aaPredicted RBP25.61■■□□□ 1.69
JRK-211ENST00000615982 YTHDC1Q96MU7 727 aaKnown RBP25.46■■□□□ 1.67
JRK-211ENST00000615982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.44■■□□□ 1.66
JRK-211ENST00000615982 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
JRK-211ENST00000615982 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
JRK-211ENST00000615982 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
JRK-211ENST00000615982 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
JRK-211ENST00000615982 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
JRK-211ENST00000615982 ANP32EQ9BTT0 268 aa25.21■■□□□ 1.63
JRK-211ENST00000615982 WIZO95785 1651 aa25.17■■□□□ 1.62
JRK-211ENST00000615982 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
JRK-211ENST00000615982 PRKCSHP14314 528 aaPredicted RBP25.09■■□□□ 1.61
JRK-211ENST00000615982 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
JRK-211ENST00000615982 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
JRK-211ENST00000615982 MIER1Q8N108 512 aa24.97■■□□□ 1.59
JRK-211ENST00000615982 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
JRK-211ENST00000615982 ZNF316A6NFI3 1004 aaPredicted RBP24.93■■□□□ 1.58
JRK-211ENST00000615982 TSHZ2Q9NRE2 1034 aa24.9■■□□□ 1.58
JRK-211ENST00000615982 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
JRK-211ENST00000615982 SUPT16HQ9Y5B9 1047 aaKnown RBP24.83■■□□□ 1.57
JRK-211ENST00000615982 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
JRK-211ENST00000615982 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
JRK-211ENST00000615982 EIF4G1Q04637 1599 aaKnown RBP24.69■■□□□ 1.54
JRK-211ENST00000615982 CCDC88BA6NC98 1476 aa24.66■■□□□ 1.54
JRK-211ENST00000615982 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
JRK-211ENST00000615982 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
JRK-211ENST00000615982 SOGA1O94964 1423 aa24.53■■□□□ 1.52
JRK-211ENST00000615982 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
JRK-211ENST00000615982 CLSPNQ9HAW4 1339 aa24.46■■□□□ 1.51
JRK-211ENST00000615982 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
JRK-211ENST00000615982 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
JRK-211ENST00000615982 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
JRK-211ENST00000615982 BCANQ96GW7 911 aa24.38■■□□□ 1.49
JRK-211ENST00000615982 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
JRK-211ENST00000615982 RANGAP1P46060 587 aaPredicted RBP24.35■■□□□ 1.49
JRK-211ENST00000615982 ERICH6Q7L0X2 663 aa24.3■■□□□ 1.48
JRK-211ENST00000615982 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
JRK-211ENST00000615982 RBM19Q9Y4C8 960 aaKnown RBP24.25■■□□□ 1.47
JRK-211ENST00000615982 WRNQ14191 1432 aaPredicted RBP eCLIP24.23■■□□□ 1.47
JRK-211ENST00000615982 MSH5O43196 834 aa24.15■■□□□ 1.46
JRK-211ENST00000615982 EEA1Q15075 1411 aa24.14■■□□□ 1.46
JRK-211ENST00000615982 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
JRK-211ENST00000615982 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
JRK-211ENST00000615982 ANO8Q9HCE9 1232 aaPredicted RBP24.1■■□□□ 1.45
JRK-211ENST00000615982 FKBP8Q14318 412 aa24.08■■□□□ 1.45
JRK-211ENST00000615982 APLP2Q06481 763 aa24.05■■□□□ 1.44
JRK-211ENST00000615982 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
JRK-211ENST00000615982 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
JRK-211ENST00000615982 ITGAEP38570 1179 aa23.99■■□□□ 1.43
JRK-211ENST00000615982 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
JRK-211ENST00000615982 CLIP1P30622 1438 aa23.96■■□□□ 1.43
JRK-211ENST00000615982 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.43
JRK-211ENST00000615982 CFTRP13569 1480 aa23.92■■□□□ 1.42
JRK-211ENST00000615982 PRDM2Q13029 1718 aa23.91■■□□□ 1.42
JRK-211ENST00000615982 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
JRK-211ENST00000615982 DEKP35659 375 aaKnown RBP23.87■■□□□ 1.41
JRK-211ENST00000615982 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
JRK-211ENST00000615982 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
JRK-211ENST00000615982 SALL2Q9Y467 1007 aaPredicted RBP23.79■■□□□ 1.4
JRK-211ENST00000615982 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
JRK-211ENST00000615982 KIF21BO75037 1637 aa23.75■■□□□ 1.39
JRK-211ENST00000615982 NEFLP07196 543 aa23.74■■□□□ 1.39
JRK-211ENST00000615982 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
JRK-211ENST00000615982 CCDC136Q96JN2 1154 aa23.73■■□□□ 1.39
JRK-211ENST00000615982 FANCIQ9NVI1 1328 aa23.69■■□□□ 1.38
JRK-211ENST00000615982 CUX1P39880 1505 aa23.68■■□□□ 1.38
JRK-211ENST00000615982 MYT1LQ9UL68 1186 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms