RNA–Protein interactions for RNA: ENST00000492969.3

RN7SL646P-201, Transcript of RNA, 7SL, cytoplasmic 646, pseudogene, humanhuman

BASIC

Gene RN7SL646P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL646P-201ENST00000492969 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
RN7SL646P-201ENST00000492969 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
RN7SL646P-201ENST00000492969 ABCC9O60706 1549 aa27.48■■□□□ 1.99
RN7SL646P-201ENST00000492969 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
RN7SL646P-201ENST00000492969 NACADO15069 1562 aa26.44■■□□□ 1.82
RN7SL646P-201ENST00000492969 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
RN7SL646P-201ENST00000492969 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
RN7SL646P-201ENST00000492969 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
RN7SL646P-201ENST00000492969 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
RN7SL646P-201ENST00000492969 UNC13AQ9UPW8 1703 aa25.86■■□□□ 1.73
RN7SL646P-201ENST00000492969 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
RN7SL646P-201ENST00000492969 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
RN7SL646P-201ENST00000492969 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
RN7SL646P-201ENST00000492969 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
RN7SL646P-201ENST00000492969 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
RN7SL646P-201ENST00000492969 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
RN7SL646P-201ENST00000492969 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
RN7SL646P-201ENST00000492969 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
RN7SL646P-201ENST00000492969 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
RN7SL646P-201ENST00000492969 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
RN7SL646P-201ENST00000492969 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
RN7SL646P-201ENST00000492969 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
RN7SL646P-201ENST00000492969 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
RN7SL646P-201ENST00000492969 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
RN7SL646P-201ENST00000492969 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
RN7SL646P-201ENST00000492969 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
RN7SL646P-201ENST00000492969 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
RN7SL646P-201ENST00000492969 WIZO95785 1651 aa24.03■■□□□ 1.44
RN7SL646P-201ENST00000492969 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
RN7SL646P-201ENST00000492969 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
RN7SL646P-201ENST00000492969 NESP48681 1621 aa23.77■■□□□ 1.4
RN7SL646P-201ENST00000492969 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
RN7SL646P-201ENST00000492969 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
RN7SL646P-201ENST00000492969 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
RN7SL646P-201ENST00000492969 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
RN7SL646P-201ENST00000492969 CFTRP13569 1480 aa23.53■■□□□ 1.36
RN7SL646P-201ENST00000492969 CUX2O14529 1486 aa23.51■■□□□ 1.35
RN7SL646P-201ENST00000492969 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
RN7SL646P-201ENST00000492969 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
RN7SL646P-201ENST00000492969 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
RN7SL646P-201ENST00000492969 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
RN7SL646P-201ENST00000492969 PRDM2Q13029 1718 aa23.35■■□□□ 1.33
RN7SL646P-201ENST00000492969 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
RN7SL646P-201ENST00000492969 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
RN7SL646P-201ENST00000492969 WDR62O43379 1518 aa23.29■■□□□ 1.32
RN7SL646P-201ENST00000492969 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
RN7SL646P-201ENST00000492969 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
RN7SL646P-201ENST00000492969 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
RN7SL646P-201ENST00000492969 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
RN7SL646P-201ENST00000492969 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
RN7SL646P-201ENST00000492969 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
RN7SL646P-201ENST00000492969 CUX1P39880 1505 aa22.82■■□□□ 1.24
RN7SL646P-201ENST00000492969 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
RN7SL646P-201ENST00000492969 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
RN7SL646P-201ENST00000492969 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
RN7SL646P-201ENST00000492969 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
RN7SL646P-201ENST00000492969 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
RN7SL646P-201ENST00000492969 SOGA1O94964 1423 aa22.69■■□□□ 1.22
RN7SL646P-201ENST00000492969 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
RN7SL646P-201ENST00000492969 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
RN7SL646P-201ENST00000492969 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
RN7SL646P-201ENST00000492969 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
RN7SL646P-201ENST00000492969 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
RN7SL646P-201ENST00000492969 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
RN7SL646P-201ENST00000492969 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.21
RN7SL646P-201ENST00000492969 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
RN7SL646P-201ENST00000492969 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
RN7SL646P-201ENST00000492969 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
RN7SL646P-201ENST00000492969 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
RN7SL646P-201ENST00000492969 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
RN7SL646P-201ENST00000492969 GRIN2BQ13224 1484 aa22.46■■□□□ 1.19
RN7SL646P-201ENST00000492969 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
RN7SL646P-201ENST00000492969 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
RN7SL646P-201ENST00000492969 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
RN7SL646P-201ENST00000492969 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
RN7SL646P-201ENST00000492969 CHD1O14646 1710 aa22.4■■□□□ 1.18
RN7SL646P-201ENST00000492969 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
RN7SL646P-201ENST00000492969 FBLN2P98095 1184 aa22.28■■□□□ 1.16
RN7SL646P-201ENST00000492969 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
RN7SL646P-201ENST00000492969 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
RN7SL646P-201ENST00000492969 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
RN7SL646P-201ENST00000492969 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
RN7SL646P-201ENST00000492969 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
RN7SL646P-201ENST00000492969 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
RN7SL646P-201ENST00000492969 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
RN7SL646P-201ENST00000492969 ARHGEF11O15085 1522 aa22.15■■□□□ 1.14
RN7SL646P-201ENST00000492969 RIMBP3CA6NJZ7 1639 aa22.14■■□□□ 1.14
RN7SL646P-201ENST00000492969 RIMBP3BA6NNM3 1639 aa22.14■■□□□ 1.14
RN7SL646P-201ENST00000492969 RIMBP3Q9UFD9 1639 aa22.14■■□□□ 1.14
RN7SL646P-201ENST00000492969 NUP160Q12769 1436 aa22.1■■□□□ 1.13
RN7SL646P-201ENST00000492969 IGF1RP08069 1367 aa22.1■■□□□ 1.13
RN7SL646P-201ENST00000492969 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
RN7SL646P-201ENST00000492969 CUL7Q14999 1698 aa22.05■■□□□ 1.12
RN7SL646P-201ENST00000492969 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
RN7SL646P-201ENST00000492969 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
RN7SL646P-201ENST00000492969 CARMIL1Q5VZK9 1371 aa21.94■■□□□ 1.1
RN7SL646P-201ENST00000492969 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
RN7SL646P-201ENST00000492969 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
RN7SL646P-201ENST00000492969 CYB5RLQ6IPT4 315 aa21.88■■□□□ 1.09
RN7SL646P-201ENST00000492969 KIAA0586Q9BVV6 1533 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms