RNA–Protein interactions for RNA: ENST00000584058.2

RN7SL4P-201, Transcript of RNA, 7SL, cytoplasmic 4, pseudogene, humanhuman

BASIC

Gene RN7SL4P, Length 295 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL4P-201ENST00000584058 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
RN7SL4P-201ENST00000584058 ABCC9O60706 1549 aa27.57■■■□□ 2
RN7SL4P-201ENST00000584058 CCDC180Q9P1Z9 1646 aa27.55■■■□□ 2
RN7SL4P-201ENST00000584058 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
RN7SL4P-201ENST00000584058 RB1CC1Q8TDY2 1594 aa26.21■■□□□ 1.79
RN7SL4P-201ENST00000584058 NACADO15069 1562 aa26.13■■□□□ 1.77
RN7SL4P-201ENST00000584058 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
RN7SL4P-201ENST00000584058 MYO15BQ96JP2 1530 aa25.84■■□□□ 1.73
RN7SL4P-201ENST00000584058 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
RN7SL4P-201ENST00000584058 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
RN7SL4P-201ENST00000584058 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
RN7SL4P-201ENST00000584058 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
RN7SL4P-201ENST00000584058 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
RN7SL4P-201ENST00000584058 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
RN7SL4P-201ENST00000584058 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
RN7SL4P-201ENST00000584058 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
RN7SL4P-201ENST00000584058 CC2D2AQ9P2K1 1620 aa24.77■■□□□ 1.56
RN7SL4P-201ENST00000584058 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
RN7SL4P-201ENST00000584058 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
RN7SL4P-201ENST00000584058 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.47
RN7SL4P-201ENST00000584058 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
RN7SL4P-201ENST00000584058 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
RN7SL4P-201ENST00000584058 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
RN7SL4P-201ENST00000584058 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
RN7SL4P-201ENST00000584058 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
RN7SL4P-201ENST00000584058 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
RN7SL4P-201ENST00000584058 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
RN7SL4P-201ENST00000584058 ERCC6Q03468 1493 aa23.76■■□□□ 1.39
RN7SL4P-201ENST00000584058 NESP48681 1621 aa23.76■■□□□ 1.39
RN7SL4P-201ENST00000584058 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
RN7SL4P-201ENST00000584058 WIZO95785 1651 aa23.7■■□□□ 1.38
RN7SL4P-201ENST00000584058 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
RN7SL4P-201ENST00000584058 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
RN7SL4P-201ENST00000584058 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
RN7SL4P-201ENST00000584058 CUX2O14529 1486 aa23.48■■□□□ 1.35
RN7SL4P-201ENST00000584058 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
RN7SL4P-201ENST00000584058 CFTRP13569 1480 aa23.3■■□□□ 1.32
RN7SL4P-201ENST00000584058 DNAJC5Q9H3Z4 198 aa23.3■■□□□ 1.32
RN7SL4P-201ENST00000584058 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
RN7SL4P-201ENST00000584058 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
RN7SL4P-201ENST00000584058 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
RN7SL4P-201ENST00000584058 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
RN7SL4P-201ENST00000584058 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
RN7SL4P-201ENST00000584058 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
RN7SL4P-201ENST00000584058 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
RN7SL4P-201ENST00000584058 WDR62O43379 1518 aa23.07■■□□□ 1.28
RN7SL4P-201ENST00000584058 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
RN7SL4P-201ENST00000584058 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
RN7SL4P-201ENST00000584058 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
RN7SL4P-201ENST00000584058 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
RN7SL4P-201ENST00000584058 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
RN7SL4P-201ENST00000584058 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
RN7SL4P-201ENST00000584058 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
RN7SL4P-201ENST00000584058 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
RN7SL4P-201ENST00000584058 SOGA1O94964 1423 aa22.64■■□□□ 1.21
RN7SL4P-201ENST00000584058 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
RN7SL4P-201ENST00000584058 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
RN7SL4P-201ENST00000584058 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
RN7SL4P-201ENST00000584058 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
RN7SL4P-201ENST00000584058 FBLN2P98095 1184 aa22.57■■□□□ 1.2
RN7SL4P-201ENST00000584058 CUX1P39880 1505 aa22.55■■□□□ 1.2
RN7SL4P-201ENST00000584058 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
RN7SL4P-201ENST00000584058 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
RN7SL4P-201ENST00000584058 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
RN7SL4P-201ENST00000584058 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
RN7SL4P-201ENST00000584058 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
RN7SL4P-201ENST00000584058 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
RN7SL4P-201ENST00000584058 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
RN7SL4P-201ENST00000584058 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
RN7SL4P-201ENST00000584058 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
RN7SL4P-201ENST00000584058 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
RN7SL4P-201ENST00000584058 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
RN7SL4P-201ENST00000584058 SYNJ1O43426 1573 aa22.22■■□□□ 1.15
RN7SL4P-201ENST00000584058 MAGI1Q96QZ7 1491 aaPredicted RBP22.21■■□□□ 1.15
RN7SL4P-201ENST00000584058 TOP2BQ02880 1626 aa22.2■■□□□ 1.15
RN7SL4P-201ENST00000584058 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
RN7SL4P-201ENST00000584058 SYNJ2O15056 1496 aa22.16■■□□□ 1.14
RN7SL4P-201ENST00000584058 ARHGEF11O15085 1522 aa22.13■■□□□ 1.13
RN7SL4P-201ENST00000584058 CHD1O14646 1710 aa22.12■■□□□ 1.13
RN7SL4P-201ENST00000584058 BIVM-ERCC5R4GMW8 1640 aa22.12■■□□□ 1.13
RN7SL4P-201ENST00000584058 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
RN7SL4P-201ENST00000584058 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
RN7SL4P-201ENST00000584058 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
RN7SL4P-201ENST00000584058 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
RN7SL4P-201ENST00000584058 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
RN7SL4P-201ENST00000584058 PBRM1Q86U86 1689 aa21.99■■□□□ 1.11
RN7SL4P-201ENST00000584058 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
RN7SL4P-201ENST00000584058 IGF1RP08069 1367 aa21.98■■□□□ 1.11
RN7SL4P-201ENST00000584058 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
RN7SL4P-201ENST00000584058 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
RN7SL4P-201ENST00000584058 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
RN7SL4P-201ENST00000584058 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.1
RN7SL4P-201ENST00000584058 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
RN7SL4P-201ENST00000584058 NUP160Q12769 1436 aa21.89■■□□□ 1.1
RN7SL4P-201ENST00000584058 TRHP20396 242 aaPredicted RBP21.89■■□□□ 1.09
RN7SL4P-201ENST00000584058 JPH4Q96JJ6 628 aa21.89■■□□□ 1.09
RN7SL4P-201ENST00000584058 CEP170Q5SW79 1584 aa21.83■■□□□ 1.09
RN7SL4P-201ENST00000584058 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
RN7SL4P-201ENST00000584058 PRG4Q92954 1404 aaPredicted RBP21.77■■□□□ 1.08
RN7SL4P-201ENST00000584058 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms